RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 AP1ARQ63HQ0 302 aa20.99■□□□□ 0.95
SIX3-201ENST00000260653 TMEM154Q6P9G4 183 aa20.99■□□□□ 0.95
SIX3-201ENST00000260653 PLXDC1Q8IUK5 500 aa20.99■□□□□ 0.95
SIX3-201ENST00000260653 SAP25Q8TEE9 199 aa20.99■□□□□ 0.95
SIX3-201ENST00000260653 CCDC74AQ96AQ1 378 aa20.99■□□□□ 0.95
SIX3-201ENST00000260653 GIMAP5Q96F15 307 aa20.99■□□□□ 0.95
SIX3-201ENST00000260653 TREX2Q9BQ50 279 aaPredicted RBP20.99■□□□□ 0.95
SIX3-201ENST00000260653 RSPO3Q9BXY4 272 aaPredicted RBP20.99■□□□□ 0.95
SIX3-201ENST00000260653 SPRTNQ9H040 489 aaPredicted RBP20.99■□□□□ 0.95
SIX3-201ENST00000260653 SOX17Q9H6I2 414 aaPredicted RBP20.99■□□□□ 0.95
SIX3-201ENST00000260653 TPD52L2O43399 206 aaKnown RBP20.98■□□□□ 0.95
SIX3-201ENST00000260653 CD1CP29017 333 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 SOX18P35713 384 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 CHN2P52757 468 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 GPLD1P80108 840 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 FUT5Q11128 374 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 NDUFA9Q16795 377 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 CEP68Q76N32 757 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 WDR53Q7Z5U6 358 aaPredicted RBP20.98■□□□□ 0.95
SIX3-201ENST00000260653 MIPOL1Q8TD10 442 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 CYGBQ8WWM9 190 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 BARD1Q99728 777 aaKnown RBP20.98■□□□□ 0.95
SIX3-201ENST00000260653 ANKRD60Q9BZ19 345 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 CHRNA10Q9GZZ6 450 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 EPB41L1Q9H4G0 881 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 NDUFAF4Q9P032 175 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 KCNE3Q9Y6H6 103 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 TTC28Q96AY4 2481 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 TMEM247A6NEH6 219 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 GPR75O95800 540 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 NR2F1P10589 423 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 PPP2R2BQ00005 443 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 MAT1AQ00266 395 aaKnown RBP20.98■□□□□ 0.95
SIX3-201ENST00000260653 MFSD4BQ5TF39 518 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 METTL27Q8N6F8 245 aaPredicted RBP20.98■□□□□ 0.95
SIX3-201ENST00000260653 TANKQ92844 425 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 OSBPL10Q9BXB5 764 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 SH3GLB1Q9Y371 365 aa20.98■□□□□ 0.95
SIX3-201ENST00000260653 PATE3B3GLJ2 98 aa20.97■□□□□ 0.95
SIX3-201ENST00000260653 SHQ1Q6PI26 577 aaKnown RBP20.97■□□□□ 0.95
SIX3-201ENST00000260653 OR7D2Q96RA2 312 aa20.97■□□□□ 0.95
SIX3-201ENST00000260653 MN1Q10571 1320 aaPredicted RBP20.97■□□□□ 0.95
SIX3-201ENST00000260653 FAM53BQ14153 422 aa20.97■□□□□ 0.95
SIX3-201ENST00000260653 SYT16Q17RD7 645 aa20.97■□□□□ 0.95
SIX3-201ENST00000260653 ZIK1Q3SY52 487 aaPredicted RBP20.97■□□□□ 0.95
SIX3-201ENST00000260653 SLC36A3Q495N2 470 aa20.97■□□□□ 0.95
SIX3-201ENST00000260653 ZNF628Q5EBL2 1059 aa20.97■□□□□ 0.95
SIX3-201ENST00000260653 TCTE1Q5JU00 501 aa20.97■□□□□ 0.95
SIX3-201ENST00000260653 PEAR1Q5VY43 1037 aaPredicted RBP20.97■□□□□ 0.95
SIX3-201ENST00000260653 ARMC8Q8IUR7 673 aa20.97■□□□□ 0.95
SIX3-201ENST00000260653 OR2L13Q8N349 312 aa20.97■□□□□ 0.95
SIX3-201ENST00000260653 DTWD2Q8NBA8 298 aa20.97■□□□□ 0.95
SIX3-201ENST00000260653 OR2I1PQ8NGU4 316 aa20.97■□□□□ 0.95
SIX3-201ENST00000260653 ANKRD9Q96BM1 317 aaPredicted RBP20.97■□□□□ 0.95
SIX3-201ENST00000260653 GAREM1Q9H706 876 aa20.97■□□□□ 0.95
SIX3-201ENST00000260653 SAMHD1Q9Y3Z3 626 aaKnown RBP20.97■□□□□ 0.95
SIX3-201ENST00000260653 A8MU76 341 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 MFN2O95140 757 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 NSA2O95478 260 aaKnown RBP20.96■□□□□ 0.95
SIX3-201ENST00000260653 CLIC3O95833 236 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 RECKO95980 971 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 ATP1B1P05026 303 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 PPP2R1BP30154 601 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 MAGEA8P43361 318 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 MAN2A2P49641 1150 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 ANXA11P50995 505 aaKnown RBP20.96■□□□□ 0.95
SIX3-201ENST00000260653 TRMT12Q53H54 448 aaKnown RBP20.96■□□□□ 0.95
SIX3-201ENST00000260653 HIPK1Q86Z02 1210 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 LGI4Q8N135 537 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 GEMIN6Q8WXD5 167 aaKnown RBP20.96■□□□□ 0.95
SIX3-201ENST00000260653 PEX11GQ96HA9 241 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 FBXL20Q96IG2 436 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 COL21A1Q96P44 957 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 MS4A4EQ96PG1 132 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 NUDT22Q9BRQ3 303 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 DUSP23Q9BVJ7 150 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 DNAAF2Q9NVR5 837 aaKnown RBP20.96■□□□□ 0.95
SIX3-201ENST00000260653 NTMQ9P121 344 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 SEC16AO15027 2179 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 HPRP00739 348 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 CHRM4P08173 479 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 THRBP10828 461 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 CD247P20963 164 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 YAP1P46937 504 aaKnown RBP20.96■□□□□ 0.95
SIX3-201ENST00000260653 HSD11B2P80365 405 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 DHRSXQ8N5I4 330 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 OR4C6Q8NH72 309 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 ZC3H10Q96K80 434 aaKnown RBP20.96■□□□□ 0.95
SIX3-201ENST00000260653 RBM4BQ9BQ04 359 aaKnown RBP20.96■□□□□ 0.95
SIX3-201ENST00000260653 RBM4Q9BWF3 364 aaKnown RBP20.96■□□□□ 0.95
SIX3-201ENST00000260653 SCOCQ9UIL1 159 aa20.96■□□□□ 0.95
SIX3-201ENST00000260653 TMEM184BQ9Y519 407 aaPredicted RBP20.96■□□□□ 0.95
SIX3-201ENST00000260653 LY6G6EA0A0G2JKS1 128 aa20.95■□□□□ 0.94
SIX3-201ENST00000260653 PDE9AO76083 593 aa20.95■□□□□ 0.94
SIX3-201ENST00000260653 NELFEP18615 380 aaKnown RBP20.95■□□□□ 0.94
SIX3-201ENST00000260653 ARL4DP49703 201 aa20.95■□□□□ 0.94
SIX3-201ENST00000260653 CRISP3P54108 245 aa20.95■□□□□ 0.94
SIX3-201ENST00000260653 SKP1P63208 163 aa20.95■□□□□ 0.94
SIX3-201ENST00000260653 MYBPC1Q00872 1141 aa20.95■□□□□ 0.94
SIX3-201ENST00000260653 GARNL3Q5VVW2 1013 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms