RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 NTSP30990 170 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 STT3AP46977 705 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 TRPC1P48995 793 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 XKP51811 444 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 CXADRP78310 365 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 PCOLCEQ15113 449 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 CEBPEQ15744 281 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 LRIF1Q5T3J3 769 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 C8orf82Q6P1X6 216 aaPredicted RBP19.33■□□□□ 0.68
RTCA-201ENST00000260563 PAPD4Q6PIY7 484 aaKnown RBP19.33■□□□□ 0.68
RTCA-201ENST00000260563 DNAJC14Q6Y2X3 702 aaPredicted RBP19.33■□□□□ 0.68
RTCA-201ENST00000260563 NDUFAF7Q7L592 441 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 SAMD14Q8IZD0 417 aaPredicted RBP19.33■□□□□ 0.68
RTCA-201ENST00000260563 DEFB107AQ8IZN7 70 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 ST13P4Q8IZP2 240 aaPredicted RBP19.33■□□□□ 0.68
RTCA-201ENST00000260563 OR4A15Q8NGL6 344 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 ZBED6CLQ96FA7 236 aaPredicted RBP19.33■□□□□ 0.68
RTCA-201ENST00000260563 BBS4Q96RK4 519 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 LPAR4Q99677 370 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 HOPXQ9BPY8 73 aaPredicted RBP19.33■□□□□ 0.68
RTCA-201ENST00000260563 SLC39A3Q9BRY0 314 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 PAIP1Q9H074 479 aaKnown RBP19.33■□□□□ 0.68
RTCA-201ENST00000260563 ZNF700Q9H0M5 742 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 ACSS1Q9NUB1 689 aaPredicted RBP19.33■□□□□ 0.68
RTCA-201ENST00000260563 PCDHGB4Q9UN71 923 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 PTPRQQ9UMZ3 2332 aa19.33■□□□□ 0.68
RTCA-201ENST00000260563 TPRP12270 2363 aaKnown RBP19.32■□□□□ 0.68
RTCA-201ENST00000260563 NSG1A0A0A6YYJ2 146 aa19.32■□□□□ 0.68
RTCA-201ENST00000260563 MYO1GB0I1T2 1018 aa19.32■□□□□ 0.68
RTCA-201ENST00000260563 SEC24DO94855 1032 aaPredicted RBP19.32■□□□□ 0.68
RTCA-201ENST00000260563 ANP32DO95626 131 aa19.32■□□□□ 0.68
RTCA-201ENST00000260563 CPMP14384 443 aa19.32■□□□□ 0.68
RTCA-201ENST00000260563 CDKN2CP42773 168 aa19.32■□□□□ 0.68
RTCA-201ENST00000260563 MANFP55145 182 aaKnown RBP19.32■□□□□ 0.68
RTCA-201ENST00000260563 PSME3P61289 254 aa19.32■□□□□ 0.68
RTCA-201ENST00000260563 CAPRIN1Q14444 709 aaKnown RBP19.32■□□□□ 0.68
RTCA-201ENST00000260563 MLC1Q15049 377 aa19.32■□□□□ 0.68
RTCA-201ENST00000260563 ELAVL1Q15717 326 aaKnown RBP19.32■□□□□ 0.68
RTCA-201ENST00000260563 KIF2BQ8N4N8 673 aa19.32■□□□□ 0.68
RTCA-201ENST00000260563 GOT1L1Q8NHS2 421 aaPredicted RBP19.32■□□□□ 0.68
RTCA-201ENST00000260563 OR5P2Q8WZ92 322 aa19.32■□□□□ 0.68
RTCA-201ENST00000260563 RBM18Q96H35 190 aaKnown RBP19.32■□□□□ 0.68
RTCA-201ENST00000260563 FER1L6-AS2Q96M78 137 aa19.32■□□□□ 0.68
RTCA-201ENST00000260563 ZNF681Q96N22 645 aa19.32■□□□□ 0.68
RTCA-201ENST00000260563 GPATCH1Q9BRR8 931 aaKnown RBP19.32■□□□□ 0.68
RTCA-201ENST00000260563 A0A1W2PS29 197 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 SAGE2PA6NJ88 616 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 A8MUA0 341 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 HPP00738 406 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 GSNP06396 782 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 SLC35E2P0CK97 266 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 PORP16435 677 aaPredicted RBP19.31■□□□□ 0.68
RTCA-201ENST00000260563 CSNK2A2P19784 350 aaPredicted RBP19.31■□□□□ 0.68
RTCA-201ENST00000260563 FEN1P39748 380 aaKnown RBP19.31■□□□□ 0.68
RTCA-201ENST00000260563 NCBP2P52298 156 aaKnown RBP eCLIP19.31■□□□□ 0.68
RTCA-201ENST00000260563 HBA1P69905 142 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 ZNF750Q32MQ0 723 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 LRRC25Q8N386 305 aaPredicted RBP19.31■□□□□ 0.68
RTCA-201ENST00000260563 ZFP28Q8NHY6 868 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 CGREF1Q99674 301 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 WDR77Q9BQA1 342 aaPredicted RBP19.31■□□□□ 0.68
RTCA-201ENST00000260563 GLIPR2Q9H4G4 154 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 SLC6A13Q9NSD5 602 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 TAS2R9Q9NYW1 312 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 VAPAQ9P0L0 249 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 ERVK-11Q9UQG0 969 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 PCDHB14Q9Y5E9 798 aa19.31■□□□□ 0.68
RTCA-201ENST00000260563 GSC2O15499 205 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 DNAJC8O75937 253 aaPredicted RBP19.3■□□□□ 0.68
RTCA-201ENST00000260563 ABCB1P08183 1280 aaPredicted RBP19.3■□□□□ 0.68
RTCA-201ENST00000260563 HOXB9P17482 250 aaPredicted RBP19.3■□□□□ 0.68
RTCA-201ENST00000260563 TNNI3P19429 210 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 PTPN6P29350 595 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 MPIP34949 423 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 RRADP55042 308 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 DEFB109BQ30KR1 87 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 GTDC1Q4AE62 458 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 C6orf163Q5TEZ5 329 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 CCDC116Q8IYX3 515 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 TMEM102Q8N9M5 508 aaPredicted RBP19.3■□□□□ 0.68
RTCA-201ENST00000260563 OR14A16Q8NHC5 309 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 SUN3Q8TAQ9 357 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 DAZLQ92904 295 aaKnown RBP19.3■□□□□ 0.68
RTCA-201ENST00000260563 AMDHD1Q96NU7 426 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 CADM1Q9BY67 442 aaKnown RBP19.3■□□□□ 0.68
RTCA-201ENST00000260563 ZNF160Q9HCG1 818 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 NEUROD4Q9HD90 331 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 SLC25A37Q9NYZ2 338 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 CLCA3PQ9Y6N3 262 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 TRBV5-3A0A0A0MS03 114 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 ARGFXA6NJG6 315 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 C17orf105B2RV13 164 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 DYRK3O43781 588 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 DUSP2Q05923 314 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 HSPB3Q12988 150 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 ST3GAL2Q16842 350 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 DCAF10Q5QP82 559 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 ZNF621Q6ZSS3 439 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 ZNF551Q7Z340 670 aaPredicted RBP19.3■□□□□ 0.68
RTCA-201ENST00000260563 MSRB3Q8IXL7 192 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms