RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 MAPK12P53778 367 aa17.46■□□□□ 0.39
TM6SF1-201ENST00000258909 FUT7Q11130 342 aa17.46■□□□□ 0.39
TM6SF1-201ENST00000258909 C1orf185Q5T7R7 199 aa17.46■□□□□ 0.39
TM6SF1-201ENST00000258909 PAGE2Q7Z2X7 111 aa17.46■□□□□ 0.39
TM6SF1-201ENST00000258909 COMMD6Q7Z4G1 85 aa17.46■□□□□ 0.39
TM6SF1-201ENST00000258909 LIX1LQ8IVB5 337 aa17.46■□□□□ 0.39
TM6SF1-201ENST00000258909 DND1Q8IYX4 353 aaKnown RBP17.46■□□□□ 0.39
TM6SF1-201ENST00000258909 LRRC25Q8N386 305 aaPredicted RBP17.46■□□□□ 0.39
TM6SF1-201ENST00000258909 TMEM151AQ8N4L1 468 aa17.46■□□□□ 0.39
TM6SF1-201ENST00000258909 ZNF615Q8N8J6 731 aa17.46■□□□□ 0.39
TM6SF1-201ENST00000258909 ZNF483Q8TF39 744 aaPredicted RBP17.46■□□□□ 0.39
TM6SF1-201ENST00000258909 Q9UFV3 132 aa17.46■□□□□ 0.39
TM6SF1-201ENST00000258909 ZNF180Q9UJW8 692 aa17.46■□□□□ 0.39
TM6SF1-201ENST00000258909 ARHGAP21Q5T5U3 1957 aa17.46■□□□□ 0.38
TM6SF1-201ENST00000258909 EXPH5Q8NEV8 1989 aa17.46■□□□□ 0.38
TM6SF1-201ENST00000258909 A0A087WUV0 522 aaPredicted RBP17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 CTAGE8P0CG41 777 aa17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 ZFP36L2P47974 494 aaKnown RBP17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 TBL3Q12788 808 aaKnown RBP17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 GGTA1PQ4G0N0 100 aa17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 TCHHL1Q5QJ38 904 aaPredicted RBP17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 FAM180BQ6P0A1 224 aa17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 CTAGE4Q8IX94 777 aa17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 TRPC4APQ8TEL6 797 aa17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 SELENOMQ8WWX9 145 aa17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 ADIPOR1Q96A54 375 aa17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 ZNF225Q9UK10 706 aa17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 ADAM29Q9UKF5 820 aa17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 DTX4Q9Y2E6 619 aa17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 NPFFR2Q9Y5X5 522 aa17.45■□□□□ 0.38
TM6SF1-201ENST00000258909 WDR1O75083 606 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 ERAL1O75616 437 aaKnown RBP17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 OR4F21O95013 312 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 OTCP00480 354 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 PORP16435 677 aaPredicted RBP17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 CNTFP26441 200 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 GDF1P27539 372 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 FEN1P39748 380 aaKnown RBP17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 GALNT1Q10472 559 aaPredicted RBP17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 RPS6KA2Q15349 733 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 NNATQ16517 81 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 FAM111BQ6SJ93 734 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 DMRTC2Q8IXT2 367 aaPredicted RBP17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 LIX1Q8N485 282 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 SIMC1Q8NDZ2 872 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 MNS1Q8NEH6 495 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 TP53INP1Q96A56 240 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 CES1P1Q9UKY3 287 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 PCDHA9Q9Y5H5 950 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 EXOC1LA0A1B0GW35 172 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 TP53I11O14683 189 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 TRIM3O75382 744 aaPredicted RBP17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 TRAPPC6AO75865 159 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 SNRPAP09012 282 aaKnown RBP17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 S1PR1P21453 382 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 DEKP35659 375 aaKnown RBP17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 DUSP2Q05923 314 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 EXOSC7Q15024 291 aaKnown RBP17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 C10orf62Q5T681 223 aaPredicted RBP17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 C6orf163Q5TEZ5 329 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 TMEM198Q66K66 360 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 DESI1Q6ICB0 168 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 SLC48A1Q6P1K1 146 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 ADCY4Q8NFM4 1077 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 NEIL3Q8TAT5 605 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 SPPL2AQ8TCT8 520 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 TM4SF18Q96CE8 201 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 ZNF597Q96LX8 424 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 RILPQ96NA2 401 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 BRINP2Q9C0B6 783 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 ACKR4Q9NPB9 350 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 TMEM216Q9P0N5 145 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 B4GALT7Q9UBV7 327 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 NFU1Q9UMS0 254 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 SNX6Q9UNH7 406 aa17.44■□□□□ 0.38
TM6SF1-201ENST00000258909 C15orf38-AP3S2A0A0A6YYH1 394 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 C1orf226A1L170 272 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 CAPN14A8MX76 684 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 HOXD4P09016 255 aaPredicted RBP17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 CAPN3P20807 821 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 GPX3P22352 226 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 GCAP28676 217 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 HSD17B3P37058 310 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 ALDH9A1P49189 494 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 CLCQ05315 142 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 MGAT2Q10469 447 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 DUSP8Q13202 625 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 CDH24Q86UP0 819 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 C1orf52Q8N6N3 182 aaKnown RBP17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 CDYL2Q8N8U2 506 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 GNRHR2Q96P88 292 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 NXF5Q9H1B4 397 aaKnown RBP17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 BCAP29Q9UHQ4 241 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 MED12Q93074 2177 aa17.43■□□□□ 0.38
TM6SF1-201ENST00000258909 ANKRD33BA6NCL7 494 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 KDM4EB2RXH2 506 aaPredicted RBP17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 SUPT7LO94864 414 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 CHN1P15882 459 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 ABCD3P28288 659 aa17.42■□□□□ 0.38
TM6SF1-201ENST00000258909 MASP1P48740 699 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms