RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 HOXB6P17509 224 aaKnown RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 PTPRZ1P23471 2315 aaPredicted RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 CHI3L1P36222 383 aaPredicted RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 CDK9P50750 372 aaKnown RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 MVDP53602 400 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 LIPEQ05469 1076 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 MGAT2Q10469 447 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 GAB1Q13480 694 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 CEACAM7Q14002 265 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 VEZF1Q14119 521 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 ELAVL1Q15717 326 aaKnown RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 NSDHLQ15738 373 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 SPDYE7PQ495Y7 208 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 RABL3Q5HYI8 236 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 FHL5Q5TD97 284 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 DNAJC14Q6Y2X3 702 aaPredicted RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 C6orf120Q7Z4R8 191 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 PROSER1Q86XN7 944 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 GALNT12Q8IXK2 581 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 VWA5B2Q8N398 1253 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 OR52E4Q8NGH9 312 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 OR9A2Q8NGT5 310 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 DAZLQ92904 295 aaKnown RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 RIT1Q92963 219 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 ZNF583Q96ND8 569 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 SLC46A1Q96NT5 459 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 MS4A4EQ96PG1 132 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 GPR87Q9BY21 358 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 NRSN2Q9GZP1 204 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 VN1R1Q9GZP7 353 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 ZCCHC3Q9NUD5 404 aaKnown RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 DDX18Q9NVP1 670 aaKnown RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 MAT2BQ9NZL9 334 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 CTSFQ9UBX1 484 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 C19orf25Q9UFG5 118 aaPredicted RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 SLC7A8Q9UHI5 535 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 MKL2Q9ULH7 1088 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 CFL2Q9Y281 166 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 SNX8Q9Y5X2 465 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 SEC16AO15027 2179 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 A0A1W2PNU3 283 aaPredicted RBP12.1□□□□□ -0.47
LSM8-201ENST00000249299 IDSB3KWA1 339 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 C21orf140B9A014 251 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 UPK1AO00322 258 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 STAMBPO95630 424 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 ZNF28P17035 718 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 NT5EP21589 574 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 SOAT1P35610 550 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 PRIM2P49643 509 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 GSK3BP49841 420 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 GZMMP51124 257 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 MTPNP58546 118 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 PSPHP78330 225 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 BTG2P78543 158 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 DUSP2Q05923 314 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 FUT7Q11130 342 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 TP53BP2Q13625 1128 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 NCF4Q15080 339 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 ZNF750Q32MQ0 723 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 GTDC1Q4AE62 458 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 MINDY4Q4G0A6 757 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 VWA2Q5GFL6 755 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 MTX3Q5HYI7 312 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 FAM198BQ6UWH4 519 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 OR4N5Q8IXE1 308 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 OR2T12Q8NG77 320 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 OR2Y1Q8NGV0 311 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 OR14A16Q8NHC5 309 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 METTL21AQ8WXB1 218 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 HOXB13Q92826 284 aaPredicted RBP12.1□□□□□ -0.47
LSM8-201ENST00000249299 MR1Q95460 341 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 SPSB2Q99619 263 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 KCTD14Q9BQ13 255 aaPredicted RBP12.1□□□□□ -0.47
LSM8-201ENST00000249299 CHST8Q9H2A9 424 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 NECTIN3Q9NQS3 549 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 GPATCH2Q9NW75 528 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 PLA2G2EQ9NZK7 142 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 ACTR3BQ9P1U1 418 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 MAGEL2Q9UJ55 1249 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 PPIEQ9UNP9 301 aaKnown RBP12.1□□□□□ -0.47
LSM8-201ENST00000249299 SATB2Q9UPW6 733 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 POMPQ9Y244 141 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 PCDHGB3Q9Y5G1 929 aa12.1□□□□□ -0.47
LSM8-201ENST00000249299 KNTC1P50748 2209 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 SPTBP11277 2137 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 A0A1W2PQ72 361 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 ELOVL7A1L3X0 281 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 STMND1H3BQB6 276 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 TGFBR3LH3BV60 316 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 ACOT8O14734 319 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 BRINP1O60477 761 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 GMNNO75496 209 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 TNFRSF21O75509 655 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 JRKO75564 520 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 CDC123O75794 336 aaPredicted RBP12.09□□□□□ -0.47
LSM8-201ENST00000249299 TNFSF15O95150 251 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 HEXBP07686 556 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 GUSBP08236 651 aa12.09□□□□□ -0.47
LSM8-201ENST00000249299 EFNA1P20827 205 aaPredicted RBP12.09□□□□□ -0.47
LSM8-201ENST00000249299 MAOAP21397 527 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms