RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 MAT2AP31153 395 aaKnown RBP18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 LASP1Q14847 261 aaKnown RBP18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 TSTQ16762 297 aaKnown RBP18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 UAP1L1Q3KQV9 507 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 C18orf63Q68DL7 685 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 PODNL1Q6PEZ8 512 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 C19orf48Q6RUI8 117 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 FAM92BQ6ZTR7 304 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 BCDIN3DQ7Z5W3 292 aaKnown RBP18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 ATCAYQ86WG3 371 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 CCDC116Q8IYX3 515 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 TMEM145Q8NBT3 493 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 OR14C36Q8NHC7 312 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 GANCQ8TET4 914 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 Q96MT0 163 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 RPP25Q9BUL9 199 aaKnown RBP18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 RAB11FIP5Q9BXF6 653 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 NXF2Q9GZY0 626 aaKnown RBP18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 ZSCAN32Q9NX65 697 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 FBXW2Q9UKT8 454 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 KLK4Q9Y5K2 254 aa18.43■□□□□ 0.54
CDC42EP1-201ENST00000249014 HMGN2P05204 90 aaKnown RBP18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 PIPP12273 146 aaPredicted RBP18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 PORP16435 677 aaPredicted RBP18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 ATP5A1P25705 553 aaKnown RBP18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 CERS1P27544 350 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 CD40LGP29965 261 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 PPP2R1BP30154 601 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 KRT73Q86Y46 540 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 OR6T1Q8NGN1 323 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 SLC6A18Q96N87 628 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 POLE4Q9NR33 117 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 MAN2C1Q9NTJ4 1040 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 KCNE3Q9Y6H6 103 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 SZT2Q5T011 3432 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 ARHGAP33O14559 1287 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 AIFM1O95831 613 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 KIR2DL1P43626 348 aaPredicted RBP18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 KHKP50053 298 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 SSX1Q16384 188 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 RPE65Q16518 533 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 TOR1AIP1Q5JTV8 583 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 TMEM201Q5SNT2 666 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 C9orf50Q5SZB4 431 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 ZNF776Q68DI1 518 aaPredicted RBP18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 CLIP4Q8N3C7 705 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 IQCF1Q8N6M8 205 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 AMER2Q8N7J2 671 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 KBTBD8Q8NFY9 601 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 FGF14Q92915 247 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 C16orf58Q96GQ5 468 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 MYADMQ96S97 322 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 DNAH14Q0VDD8 3507 aa18.42■□□□□ 0.54
CDC42EP1-201ENST00000249014 A0A1W2PRQ8 180 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 AGAP5A6NIR3 686 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 K7EQS6 105 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 NME6O75414 186 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 RAB8AP61006 207 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 RPS3AP61247 264 aaKnown RBP18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 PARM1Q6UWI2 310 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 TMEM107Q6UX40 140 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 TMEM64Q6YI46 380 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 PLEKHG7Q6ZR37 379 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 OR2L5Q8NG80 312 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 QRSL1Q9H0R6 528 aaKnown RBP18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 RMI1Q9H9A7 625 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 ANKRA2Q9H9E1 313 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 BCL2L10Q9HD36 194 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 APOBEC3BQ9UH17 382 aaKnown RBP18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 CLEC2DQ9UHP7 191 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 CES1P1Q9UKY3 287 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 YBX2Q9Y2T7 364 aaKnown RBP18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 PLRG1O43660 514 aaKnown RBP18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 RNGTTO60942 597 aaKnown RBP18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 SLITRK5O94991 958 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 TNNI3P19429 210 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 MMP11P24347 488 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 AHRP35869 848 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 SMIM11AP58511 58 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 LRRC32Q14392 662 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 TCEA2Q15560 299 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 INAVAQ3KP66 663 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 CASP12Q6UXS9 341 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 ZER1Q7Z7L7 766 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 CYP4Z2PQ8N1L4 340 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 TCEANCQ8N8B7 351 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 BBS10Q8TAM1 723 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 OPALINQ96PE5 141 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 GPA33Q99795 319 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 APOOQ9BUR5 198 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 FNDC11Q9BVV2 318 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 TAPBPLQ9BX59 468 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 FGF22Q9HCT0 170 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 CTPS2Q9NRF8 586 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 CCDC59Q9P031 241 aaKnown RBP18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 LSM2Q9Y333 95 aaKnown RBP18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 PCDHGA4Q9Y5G9 962 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 A3GALT2U3KPV4 340 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 SCN3AQ9NY46 2000 aa18.41■□□□□ 0.54
CDC42EP1-201ENST00000249014 KIAA0513O60268 411 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms