RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CHMP24386 653 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 CNR2P34972 360 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 HYAL2Q12891 473 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 ENPP2Q13822 863 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 MOGQ16653 247 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 SDE2Q6IQ49 451 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 DNAJC22Q8N4W6 341 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 OR2L8Q8NGY9 312 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 ZCCHC10Q8TBK6 192 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 SIPA1Q96FS4 1042 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 TIMM29Q9BSF4 260 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 ERGIC3Q9Y282 383 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 CARD8Q9Y2G2 431 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 GABARAPO95166 117 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 AIFM1O95831 613 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 ATXN8OSP0DMR3 200 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 HIST1H1TP22492 207 aaPredicted RBP14.89□□□□□ -0.03
LRFN1-201ENST00000248668 ACSL1P33121 698 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 BUD31P41223 144 aaPredicted RBP14.89□□□□□ -0.03
LRFN1-201ENST00000248668 TPTEP56180 551 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 KCNC4Q03721 635 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 CLPPQ16740 277 aaPredicted RBP14.89□□□□□ -0.03
LRFN1-201ENST00000248668 TJAP1Q5JTD0 557 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 SYT6Q5T7P8 510 aaPredicted RBP14.89□□□□□ -0.03
LRFN1-201ENST00000248668 OR10G6Q8NH81 332 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 KAT2AQ92830 837 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 YIPF6Q96EC8 236 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 CNRIP1Q96F85 164 aaPredicted RBP14.89□□□□□ -0.03
LRFN1-201ENST00000248668 RNF167Q9H6Y7 350 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 APOBEC3BQ9UH17 382 aaKnown RBP14.89□□□□□ -0.03
LRFN1-201ENST00000248668 PCDHGB1Q9Y5G3 927 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 LAMA1P25391 3075 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 LOC100506127A0A0U1RQW1 187 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 A0A1W2PQF6 199 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 NTSP30990 170 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 IDUAP35475 653 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 ACTR1BP42025 376 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 ACTR1AP61163 376 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 ST3GAL4Q11206 333 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 LTB4RQ15722 352 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 ELSPBP1Q96BH3 223 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 ITPKCQ96DU7 683 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 TMEM168Q9H0V1 697 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 CCNB1IP1Q9NPC3 277 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 TMCC3Q9ULS5 477 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 DENND4AQ7Z401 1863 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 OR2A25A4D2G3 310 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 DPM1O60762 260 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 RASGRP1O95267 797 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 NTN1O95631 604 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 HMGN2P05204 90 aaKnown RBP14.88□□□□□ -0.03
LRFN1-201ENST00000248668 ASGR2P07307 311 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 BTN3A2P78410 334 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 GPAT3Q53EU6 434 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 PTCHD4Q6ZW05 846 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 ADCK1Q86TW2 530 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 SFTPA2Q8IWL1 248 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 C6orf106Q9H6K1 298 aaPredicted RBP14.88□□□□□ -0.03
LRFN1-201ENST00000248668 MVB12BQ9H7P6 319 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 ZBTB20Q9HC78 741 aaPredicted RBP14.88□□□□□ -0.03
LRFN1-201ENST00000248668 A4GALTQ9NPC4 353 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 PSORS1C1Q9UIG5 152 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.88□□□□□ -0.03
LRFN1-201ENST00000248668 FAM47E-STBD1D6RA91 191 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 TNNI3P19429 210 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 CBLP22681 906 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 CLK1P49759 484 aaKnown RBP14.88□□□□□ -0.03
LRFN1-201ENST00000248668 COLEC12Q5KU26 742 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 ABHD17CQ6PCB6 329 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 OR4N5Q8IXE1 308 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 PEX5LQ8IYB4 626 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 CLIP4Q8N3C7 705 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 IQCF1Q8N6M8 205 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 OR2M4Q96R27 311 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 POLE4Q9NR33 117 aa14.88□□□□□ -0.03
LRFN1-201ENST00000248668 SPTBP11277 2137 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 CLCA1A8K7I4 914 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 MAN2B1O00754 1011 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 PTHP01270 115 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 ADRA2AP08913 450 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 ATP5A1P25705 553 aaKnown RBP14.87□□□□□ -0.03
LRFN1-201ENST00000248668 RPS3AP61247 264 aaKnown RBP14.87□□□□□ -0.03
LRFN1-201ENST00000248668 TIGD6Q17RP2 521 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 TMEFF1Q8IYR6 380 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 OR9A2Q8NGT5 310 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 PATE1Q8WXA2 126 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 MAPKAP1Q9BPZ7 522 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 FAIM2Q9BWQ8 316 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 PRDM7Q9NQW5 492 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 DNAJC27Q9NZQ0 273 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 P2RX2Q9UBL9 471 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 MC3RP41968 323 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 RNF144AP50876 292 aaPredicted RBP14.87□□□□□ -0.03
LRFN1-201ENST00000248668 TARDBPQ13148 414 aaKnown RBP eCLIP14.87□□□□□ -0.03
LRFN1-201ENST00000248668 ZNF542PQ5EBM4 170 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 DCST1Q5T197 706 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 B3GNT7Q8NFL0 401 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 IPCEF1Q8WWN9 437 aaPredicted RBP14.87□□□□□ -0.03
LRFN1-201ENST00000248668 ZG16BQ96DA0 208 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 LGALS12Q96DT0 336 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms