RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 WNT4P56705 351 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 DSTNP60981 165 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 BTG1P62324 171 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 DAB2P98082 770 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 ZNF385BQ569K4 471 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 CEP78Q5JTW2 689 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 FAM78AQ5JUQ0 283 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 DCST1Q5T197 706 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 CD200R1LQ6Q8B3 271 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 VRK3Q8IV63 474 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 ELMOD2Q8IZ81 293 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 RNF175Q8N4F7 328 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 HUS1BQ8NHY5 278 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 DEDD2Q8WXF8 326 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 FGF13Q92913 245 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 SLC6A18Q96N87 628 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 ATG10Q9H0Y0 220 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 PPP1R3EQ9H7J1 279 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 NT5DC2Q9H857 520 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 BRD9Q9H8M2 597 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 MARK1Q9P0L2 795 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 ACAD8Q9UKU7 415 aa15.1■□□□□ 0.01
SF3A2-201ENST00000221494 B8ZZF3 427 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 SLC9A3R1O14745 358 aaPredicted RBP15.09■□□□□ 0.01
SF3A2-201ENST00000221494 CPNE3O75131 537 aaKnown RBP15.09■□□□□ 0.01
SF3A2-201ENST00000221494 RECKO95980 971 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 CATP04040 527 aaKnown RBP15.09■□□□□ 0.01
SF3A2-201ENST00000221494 CCNYL3P0C7X3 344 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 MYL12AP19105 171 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 UQCRC2P22695 453 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 RRAS2P62070 204 aaPredicted RBP15.09■□□□□ 0.01
SF3A2-201ENST00000221494 SEMG2Q02383 582 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 DDX39BQ13838 428 aaKnown RBP15.09■□□□□ 0.01
SF3A2-201ENST00000221494 TCEAL5Q5H9L2 206 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 AGTRAPQ6RW13 159 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 ZNF852Q6ZMS4 543 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 DPY19L3Q6ZPD9 716 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 IDO2Q6ZQW0 420 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 RFPL4BQ6ZWI9 263 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 OR2AP1Q8NGE2 309 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 DNAJA4Q8WW22 397 aaPredicted RBP15.09■□□□□ 0.01
SF3A2-201ENST00000221494 SNAPC3Q92966 411 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 ASB16Q96NS5 453 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 IL4I1Q96RQ9 567 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 C11orf16Q9NQ32 467 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 DNAJC27Q9NZQ0 273 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 STOX2Q9P2F5 926 aaPredicted RBP15.09■□□□□ 0.01
SF3A2-201ENST00000221494 ALG5Q9Y673 324 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 PLXNA2O75051 1894 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 PCM1Q15154 2024 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 REV3LO60673 3130 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 ZNF821O75541 412 aaPredicted RBP15.09■□□□□ 0.01
SF3A2-201ENST00000221494 B3GALNT1O75752 331 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 OR2B3O76000 313 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 ETHE1O95571 254 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 SLC2A2P11168 524 aaPredicted RBP15.09■□□□□ 0.01
SF3A2-201ENST00000221494 GALP22466 123 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 ELAVL4P26378 380 aaKnown RBP15.09■□□□□ 0.01
SF3A2-201ENST00000221494 POU1F1P28069 291 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 GABRA5P31644 462 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 CTSOP43234 321 aaPredicted RBP15.09■□□□□ 0.01
SF3A2-201ENST00000221494 DGKGP49619 791 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 DCDC1P59894 354 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 SEC23BQ15437 767 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 LIPKQ5VXJ0 399 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 BICRALQ6AI39 1079 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 FAM71E1Q6IPT2 247 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 MZT2AQ6P582 158 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 USP30Q70CQ3 517 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 TSPAN33Q86UF1 283 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 SPERTQ8NA61 448 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 FBXO15Q8NCQ5 510 aaPredicted RBP15.09■□□□□ 0.01
SF3A2-201ENST00000221494 OR52I1Q8NGK6 324 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 CHFRQ96EP1 664 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 KCNJ15Q99712 375 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 FUZQ9BT04 418 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 ZSCAN32Q9NX65 697 aa15.09■□□□□ 0.01
SF3A2-201ENST00000221494 EXOSC1Q9Y3B2 195 aaKnown RBP15.09■□□□□ 0.01
SF3A2-201ENST00000221494 NOS1APO75052 506 aaPredicted RBP15.08■□□□□ 0
SF3A2-201ENST00000221494 H1F0P07305 194 aaKnown RBP15.08■□□□□ 0
SF3A2-201ENST00000221494 SRCP12931 536 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 IFNA8P32881 189 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 SPINT3P49223 89 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 SNRPD1P62314 119 aaKnown RBP15.08■□□□□ 0
SF3A2-201ENST00000221494 RAB40BQ12829 278 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 GANABQ14697 944 aaKnown RBP15.08■□□□□ 0
SF3A2-201ENST00000221494 DHCR24Q15392 516 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 ANKRD54Q6NXT1 300 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 HDDC2Q7Z4H3 204 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 LRRC56Q8IYG6 542 aaPredicted RBP15.08■□□□□ 0
SF3A2-201ENST00000221494 CAMKK1Q8N5S9 505 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 SMARCD2Q92925 531 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 CREB3L1Q96BA8 519 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 EFCAB11Q9BUY7 163 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 KATNB1Q9BVA0 655 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 CPEB1Q9BZB8 566 aaKnown RBP15.08■□□□□ 0
SF3A2-201ENST00000221494 POLR2J3Q9H1A7 115 aaKnown RBP15.08■□□□□ 0
SF3A2-201ENST00000221494 FOLH1BQ9HBA9 442 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 TRIM39Q9HCM9 518 aa15.08■□□□□ 0
SF3A2-201ENST00000221494 GDE1Q9NZC3 331 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms