RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 SMU1Q2TAY7 513 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 ZNF628Q5EBL2 1059 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 AGBL2Q5U5Z8 902 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 RTL4Q6ZR62 310 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 GALNTL5Q7Z4T8 443 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 DDIASQ8IXT1 998 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 LRRC34Q8IZ02 419 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 MTERF3Q96E29 417 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 OR10A5Q9H207 317 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 VIPAS39Q9H9C1 493 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 MIEF1Q9NQG6 463 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 MAP10Q9P2G4 905 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 ZDHHC2Q9UIJ5 367 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 RAP2CQ9Y3L5 183 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 POLR3HQ9Y535 204 aaPredicted RBP16.11■□□□□ 0.17
MRPL28-201ENST00000199706 PTGDR2Q9Y5Y4 395 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 DOPEY1Q5JWR5 2465 aa16.11■□□□□ 0.17
MRPL28-201ENST00000199706 SPTAN1Q13813 2472 aaKnown RBP16.1■□□□□ 0.17
MRPL28-201ENST00000199706 ANKUB1A6NFN9 424 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 MYO1GB0I1T2 1018 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 PLOD3O60568 738 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 OR6B1O95007 311 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 FBXO45P0C2W1 286 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 CT62P0C5K7 136 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 LINC00032P0C843 101 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 DDX5P17844 614 aaKnown RBP16.1■□□□□ 0.17
MRPL28-201ENST00000199706 SDC1P18827 310 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 GNLYP22749 145 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 SSTR4P31391 388 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 MPIP34949 423 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 FEN1P39748 380 aaKnown RBP16.1■□□□□ 0.17
MRPL28-201ENST00000199706 MAGOHP61326 146 aaKnown RBP16.1■□□□□ 0.17
MRPL28-201ENST00000199706 DCAF7P61962 342 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 PDE7AQ13946 482 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.1■□□□□ 0.17
MRPL28-201ENST00000199706 ZNF791Q3KP31 576 aaPredicted RBP16.1■□□□□ 0.17
MRPL28-201ENST00000199706 CES4AQ5XG92 561 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 LYPD8Q6UX82 237 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 BNC2Q6ZN30 1099 aaPredicted RBP16.1■□□□□ 0.17
MRPL28-201ENST00000199706 TAGAPQ8N103 731 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 ZFP62Q8NB50 900 aaPredicted RBP16.1■□□□□ 0.17
MRPL28-201ENST00000199706 PSD4Q8NDX1 1056 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 SPACA9Q96E40 222 aaPredicted RBP16.1■□□□□ 0.17
MRPL28-201ENST00000199706 SH2D2AQ9NP31 389 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 KLHL1Q9NR64 748 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 PRODH2Q9UF12 536 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 EXO1Q9UQ84 846 aaKnown RBP16.1■□□□□ 0.17
MRPL28-201ENST00000199706 ERVK-11Q9UQG0 969 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 FIS1Q9Y3D6 152 aa16.1■□□□□ 0.17
MRPL28-201ENST00000199706 FLNBO75369 2602 aaKnown RBP16.09■□□□□ 0.17
MRPL28-201ENST00000199706 A0A087WV62 115 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 C2orf92A0A1B0GVN3 265 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 CAPN14A8MX76 684 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 PYCARD-AS1I3L0S3 204 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 NAGAP17050 411 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 SOX18P35713 384 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 UQCRFS1P47985 274 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 TMED10P49755 219 aaKnown RBP16.09■□□□□ 0.17
MRPL28-201ENST00000199706 WDR4P57081 412 aaKnown RBP16.09■□□□□ 0.17
MRPL28-201ENST00000199706 RPL38P63173 70 aaKnown RBP16.09■□□□□ 0.17
MRPL28-201ENST00000199706 DUSP2Q05923 314 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 C2orf80Q0P641 193 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 MAPKAPK3Q16644 382 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 ZNF750Q32MQ0 723 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 ATP6AP1LQ52LC2 224 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 RFTN2Q52LD8 501 aaPredicted RBP16.09■□□□□ 0.17
MRPL28-201ENST00000199706 KRTCAP3Q53RY4 240 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 HHATQ5VTY9 493 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 C16orf47Q6ZP98 133 aaPredicted RBP16.09■□□□□ 0.17
MRPL28-201ENST00000199706 TICAM1Q8IUC6 712 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 FAM9CQ8IZT9 166 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 C16orf52Q8NHV5 167 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 ADIPOR1Q96A54 375 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 EXOSC8Q96B26 276 aaKnown RBP16.09■□□□□ 0.17
MRPL28-201ENST00000199706 GAL3ST4Q96RP7 486 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 SECISBP2Q96T21 854 aaKnown RBP16.09■□□□□ 0.17
MRPL28-201ENST00000199706 SORT1Q99523 831 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 HES7Q9BYE0 225 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 ASIC5Q9NY37 505 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 NKIRAS1Q9NYS0 192 aa16.09■□□□□ 0.17
MRPL28-201ENST00000199706 USP9YO00507 2555 aaPredicted RBP16.09■□□□□ 0.17
MRPL28-201ENST00000199706 PLOD2O00469 737 aa16.08■□□□□ 0.16
MRPL28-201ENST00000199706 ACOX3O15254 700 aa16.08■□□□□ 0.16
MRPL28-201ENST00000199706 ZNF354AO60765 605 aaPredicted RBP16.08■□□□□ 0.16
MRPL28-201ENST00000199706 LYPLA1O75608 230 aaPredicted RBP16.08■□□□□ 0.16
MRPL28-201ENST00000199706 CBX7O95931 251 aa16.08■□□□□ 0.16
MRPL28-201ENST00000199706 PCSK2P16519 638 aa16.08■□□□□ 0.16
MRPL28-201ENST00000199706 GPX3P22352 226 aa16.08■□□□□ 0.16
MRPL28-201ENST00000199706 TACR1P25103 407 aa16.08■□□□□ 0.16
MRPL28-201ENST00000199706 NTSP30990 170 aa16.08■□□□□ 0.16
MRPL28-201ENST00000199706 RPL3P39023 403 aaKnown RBP16.08■□□□□ 0.16
MRPL28-201ENST00000199706 SLC1A6P48664 564 aa16.08■□□□□ 0.16
MRPL28-201ENST00000199706 RPL14P50914 215 aaKnown RBP16.08■□□□□ 0.16
MRPL28-201ENST00000199706 MAD2L1Q13257 205 aaPredicted RBP16.08■□□□□ 0.16
MRPL28-201ENST00000199706 STX3Q13277 289 aa16.08■□□□□ 0.16
MRPL28-201ENST00000199706 ELOAQ14241 798 aaKnown RBP16.08■□□□□ 0.16
MRPL28-201ENST00000199706 NTRK2Q16620 822 aa16.08■□□□□ 0.16
MRPL28-201ENST00000199706 HLA-DQA1Q5Y7H0 255 aa16.08■□□□□ 0.16
MRPL28-201ENST00000199706 RGS9BPQ6ZS82 235 aa16.08■□□□□ 0.16
MRPL28-201ENST00000199706 HDXQ7Z353 690 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms