RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Lrrc3P59034 257 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Bop1P97452 732 aaKnown RBP11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Abhd4Q8VD66 342 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr781Q8VFZ8 311 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Macrod1Q922B1 323 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Insm2Q9JMC2 493 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm21865A0A087WRL2 222 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ddi2A2ADY9 399 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 RfngO09009 332 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Hsd3b6O35469 373 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cd14P10810 366 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 CryabP23927 175 aaKnown RBP11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Serpinf1P97298 417 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 AcadsQ07417 412 aaKnown RBP11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 AccslQ3UX83 580 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 B3gnt3Q5JCS9 372 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Foxd3Q61060 465 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Slc35d3Q8BGF8 422 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Znf786Q8BV42 777 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr1033Q8VFK5 310 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Zfp65Q91W94 390 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Med8Q9D7W5 268 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Osbpl3Q9DBS9 855 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rgs1Q9JL25 209 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tsc2Q61037 1814 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Vmn2r12L7N217 831 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 TertO70372 1122 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tlx2Q61663 284 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tmeff1Q6PFE7 372 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Carns1Q6ZPS2 827 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ankrd9Q8BH83 326 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Vmn1r189Q8K3N3 312 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 NaxeQ8K4Z3 282 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Capn8Q91VA3 703 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Mrgprb4Q91ZC0 321 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 4931417E11RikQ9CR05 305 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Bex4Q9CWT2 118 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 NaxdQ9CZ42 343 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Kat8Q9D1P2 458 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Trim3Q9R1R2 744 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr592E9PYB3 312 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Hoxa10P31310 416 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Hyal4Q05A56 481 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Fzd6Q61089 709 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Spin1Q61142 262 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Fgfr3Q61851 801 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Znf728Q6P5C7 752 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tas2r110Q7M712 333 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Oard1Q8R5F3 152 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 1700069L16RikQ9D9H5 109 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 D3Ertd254eA0A0G2JEM5 796 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rdh8D3Z6W3 317 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ugt2b17P17717 530 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Igfbp7Q61581 281 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ahcyl1Q80SW1 530 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 GnalQ8CGK7 381 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cables2Q8K3M5 476 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tlr4Q9QUK6 835 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 ProdhQ9WU79 599 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Slc7a5Q9Z127 512 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr560A0A1B0GSU5 314 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tbc1d25A1A5B6 742 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cd209fD3Z1H5 274 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 CcnfP51944 777 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Armc5Q5EBP3 926 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 2900092C05RikQ5I0V9 184 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr1361Q8VFH0 317 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Prss23Q9D6X6 382 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Mageh1Q9NWG9 218 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gdf2Q9WV56 428 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm29276A0A087WNW5 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm21117A0A087WPJ9 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm20820A0A087WPP3 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm20937A0A087WQA3 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm21258A0A087WQC7 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm28102A0A087WQL3 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm21095A0A087WR14 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm20792A0A087WRF5 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm28576A0A087WRP6 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm28490A0A087WRT9 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm21294A0A087WS79 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm20824A0A087WS97 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm21996A0A087WSS9 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm28870A0A0A6YW38 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm29866A0A0A6YX04 222 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Smim17A0A504 109 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm6592A2AHC7 168 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Adam34A2RSG8 714 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Zfp282E9PVC2 666 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr1513L7N457 313 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 TsxP70675 144 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Lpar5Q149R9 372 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Klra2Q60660 288 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Sox17Q61473 419 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Kctd12Q6WVG3 327 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 SnupnQ80W37 358 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Plekha1Q8BUL6 383 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Serpinb11Q9CQV3 388 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Fndc8Q9D2H8 321 aa11.3□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tcf7l1Q9Z1J1 584 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 57.7 ms