RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	SLC15A4	Q8N697	577 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	GOLM1	Q8NBJ4	401 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	SLC22A8	Q8TCC7	542 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	KLHL29	Q96CT2	875 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	SGCZ	Q96LD1	299 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	FAM111A	Q96PZ2	611 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	GAL3ST4	Q96RP7	486 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	SMC6	Q96SB8	1091 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	WWTR1	Q9GZV5	400 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	SIRT5	Q9NXA8	310 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	RAB21	Q9UL25	225 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	NPIPA1	Q9UND3	350 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	GNG14	A0A1W2PPG7	69 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	ASNA1	O43681	348 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	SPAG7	O75391	227 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	CLPS	P04118	112 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	IL3	P08700	152 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	CT62	P0C5K7	136 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	DRD2	P14416	443 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	CSNK2A2	P19784	350 aa	Predicted RBP	13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	NT5E	P21589	574 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	SERPINB3	P29508	390 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	SSTR4	P31391	388 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	TIA1	P31483	386 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	PER3	P56645	1201 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	GPR85	P60893	370 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	FUT7	Q11130	342 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	EBP	Q15125	230 aa	Known RBP	13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	IMPG1	Q17R60	797 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	RNFT1	Q5M7Z0	435 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	C1QL3	Q5VWW1	255 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	GALNT18	Q6P9A2	607 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	TRIM46	Q7Z4K8	759 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	C11orf24	Q96F05	449 aa	Predicted RBP	13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	TRMO	Q9BU70	441 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	GATA5	Q9BWX5	397 aa	Predicted RBP	13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	SHCBP1L	Q9BZQ2	653 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	TNFRSF12A	Q9NP84	129 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	DEPP	Q9NTK1	212 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	RYDEN	Q9NUL5	291 aa	Known RBP	13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	HEY2	Q9UBP5	337 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	DLGAP4	Q9Y2H0	992 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	ZNF780B	Q9Y6R6	833 aa		13.9	□□□□□ -0.18
PHGDH-231	ENST00000641939	CENPE	Q02224	2701 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	TFEC	O14948	347 aa	Predicted RBP	13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	SLC19A2	O60779	497 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	NADK	O95544	446 aa	Predicted RBP	13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	ATP1B1	P05026	303 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	TUBB	P07437	444 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	ANXA4	P09525	319 aa	Predicted RBP	13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	FREM3	P0C091	2139 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	GP1BB	P13224	206 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	ALDH3A1	P30838	453 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	FEN1	P39748	380 aa	Known RBP	13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	RFC3	P40938	356 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	HEPACAM	Q14CZ8	416 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	FJX1	Q86VR8	437 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	DND1	Q8IYX4	353 aa	Known RBP	13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	GHDC	Q8N2G8	530 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZFP62	Q8NB50	900 aa	Predicted RBP	13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	OR7G1	Q8NGA0	311 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	C16orf52	Q8NHV5	167 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	TCP10L	Q8TDR4	215 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	C16orf78	Q8WTQ4	265 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	RELT	Q969Z4	430 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	EBPL	Q9BY08	206 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	OR10A5	Q9H207	317 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	SLC17A7	Q9P2U7	560 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	UTS2R	Q9UKP6	389 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	MAST4	O15021	2626 aa		13.89	□□□□□ -0.19
PHGDH-231	ENST00000641939	TRGV8	A0A0C4DH27	118 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	C2orf92	A0A1B0GVN3	265 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	RSL1D1	O76021	490 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939		P04436	131 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	S1PR1	P21453	382 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	CNR1	P21554	472 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	CA7	P43166	264 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	GSTM5	P46439	218 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZNF844	Q08AG5	666 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZNF763	Q0D2J5	394 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	MAP4K2	Q12851	820 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	PRICKLE4	Q2TBC4	344 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZNF791	Q3KP31	576 aa	Predicted RBP	13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	KRT71	Q3SY84	523 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	HLA-DQA1	Q5Y7H0	255 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	CLEC6A	Q6EIG7	209 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	LYPD8	Q6UX82	237 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	TAGAP	Q8N103	731 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	LRRC25	Q8N386	305 aa	Predicted RBP	13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	VWA5B2	Q8N398	1253 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZNF615	Q8N8J6	731 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	ZNF441	Q8N8Z8	693 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	OR2M7	Q8NG81	312 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	TP53INP1	Q96A56	240 aa		13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	SPACA9	Q96E40	222 aa	Predicted RBP	13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	CNRIP1	Q96F85	164 aa	Predicted RBP	13.88	□□□□□ -0.19
PHGDH-231	ENST00000641939	MAGED4	Q96JG8	741 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms