RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 LRIT3Q3SXY7 679 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 ACSF3Q4G176 576 aaPredicted RBP5.55□□□□□ -1.52
RFC1-217ENST00000639695 CCDC183Q5T5S1 534 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 BLOC1S2Q6QNY1 142 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 CBLN3Q6UW01 205 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 WASH2PQ6VEQ5 465 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 PAQR9Q6ZVX9 377 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 RBM23Q86U06 439 aaKnown RBP5.55□□□□□ -1.52
RFC1-217ENST00000639695 ITIH5Q86UX2 942 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 RANBP3LQ86VV4 465 aaPredicted RBP5.55□□□□□ -1.52
RFC1-217ENST00000639695 LACC1Q8IV20 430 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 CCDC36Q8IYA8 594 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 ZCCHC7Q8N3Z6 543 aaKnown RBP5.55□□□□□ -1.52
RFC1-217ENST00000639695 GVQW1Q8N7I0 195 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 FAM133AQ8N9E0 248 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 TMEM178AQ8NBL3 297 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 OR5AP2Q8NGF4 316 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 OR5M9Q8NGP3 310 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 OR6S1Q8NH40 331 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 LMO3Q8TAP4 145 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 PNPLA2Q96AD5 504 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 SENP8Q96LD8 212 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 VSTM2LQ96N03 204 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 UHRF2Q96PU4 802 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 ZNF607Q96SK3 696 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 LRRCC1Q9C099 1032 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 CXXC4Q9H2H0 198 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 POLD4Q9HCU8 107 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 SMPD3Q9NY59 655 aaPredicted RBP5.55□□□□□ -1.52
RFC1-217ENST00000639695 MAB21L2Q9Y586 359 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 FKBP7Q9Y680 259 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 RNF215Q9Y6U7 377 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 ZHX2Q9Y6X8 837 aa5.55□□□□□ -1.52
RFC1-217ENST00000639695 BUB3O43684 328 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 TSPAN2O60636 221 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 SDC3O75056 442 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 ZNF821O75541 412 aaPredicted RBP5.54□□□□□ -1.52
RFC1-217ENST00000639695 AP2A2O94973 939 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 ANXA4P09525 319 aaPredicted RBP5.54□□□□□ -1.52
RFC1-217ENST00000639695 SLC35G4P0C7Q5 338 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 PTPN4P29074 926 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 GPR183P32249 361 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 NANOS2P60321 138 aaKnown RBP5.54□□□□□ -1.52
RFC1-217ENST00000639695 EXOSC2Q13868 293 aaKnown RBP5.54□□□□□ -1.52
RFC1-217ENST00000639695 ASPHD2Q6ICH7 369 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 KIAA1161Q6NSJ0 714 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 TRIM65Q6PJ69 517 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 C19orf48Q6RUI8 117 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 SLC26A9Q7LBE3 791 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 RAB42Q8N4Z0 105 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 RFLNBQ8N5W9 214 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 EIF1ADQ8N9N8 165 aaKnown RBP5.54□□□□□ -1.52
RFC1-217ENST00000639695 RPLP0P6Q8NHW5 317 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 HPDLQ96IR7 371 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 C4orf36Q96KX1 117 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 INPP4AQ96PE3 977 aaPredicted RBP5.54□□□□□ -1.52
RFC1-217ENST00000639695 FUCA2Q9BTY2 467 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 HIPK2Q9H2X6 1198 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 VCX2Q9H322 139 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 KAT8Q9H7Z6 458 aaKnown RBP5.54□□□□□ -1.52
RFC1-217ENST00000639695 MTHFD2LQ9H903 347 aaPredicted RBP5.54□□□□□ -1.52
RFC1-217ENST00000639695 LPAR2Q9HBW0 351 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 KLHL8Q9P2G9 620 aaPredicted RBP5.54□□□□□ -1.52
RFC1-217ENST00000639695 TUBGCP4Q9UGJ1 667 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 CHRNA9Q9UGM1 479 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 CTNNA3Q9UI47 895 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 C2CD2Q9Y426 696 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 CARMIL1Q5VZK9 1371 aa5.54□□□□□ -1.52
RFC1-217ENST00000639695 IGHV4-4A0A075B6R2 117 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 FAM172BPA6NC97 362 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 ANHXE9PGG2 379 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 AP3B1O00203 1094 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 TSC22D2O75157 780 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 MTRF1O75570 445 aaKnown RBP5.53□□□□□ -1.52
RFC1-217ENST00000639695 STK17BO94768 372 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 MBD3O95983 291 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 HPRP00739 348 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 RPLP0P05388 317 aaKnown RBP5.53□□□□□ -1.52
RFC1-217ENST00000639695 F7P08709 466 aaPredicted RBP5.53□□□□□ -1.52
RFC1-217ENST00000639695 FGF3P11487 239 aaPredicted RBP5.53□□□□□ -1.52
RFC1-217ENST00000639695 UQCRBP14927 111 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 CEBPBP17676 345 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 TSPAN8P19075 237 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 PSMA2P25787 234 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 RPL9P32969 192 aaKnown RBP5.53□□□□□ -1.52
RFC1-217ENST00000639695 TRIM23P36406 574 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 TSFMP43897 325 aaKnown RBP5.53□□□□□ -1.52
RFC1-217ENST00000639695 METAP1P53582 386 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 PAX9P55771 341 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 NOP14P78316 857 aaKnown RBP5.53□□□□□ -1.52
RFC1-217ENST00000639695 RBBP4Q09028 425 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 GCKRQ14397 625 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 HAGHQ16775 308 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 HKDC1Q2TB90 917 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 FILIP1LQ4L180 1135 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 BOLA3Q53S33 107 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 STEAP1BQ6NZ63 245 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 LHFPL4Q7Z7J7 247 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 HOGA1Q86XE5 327 aa5.53□□□□□ -1.52
RFC1-217ENST00000639695 ZNF679Q8IYX0 411 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms