RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 USP17L20D6RJB6 530 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 PLA2G10O15496 165 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 GPX5O75715 221 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 LATS1O95835 1130 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 MT-ND4LP03901 98 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 TCRBP04435 133 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 GABRB1P18505 474 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 CPT2P23786 658 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 CCR4P51679 360 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 RAB8AP61006 207 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 USP17L24Q0WX57 530 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 CAMK2GQ13555 558 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 GPR176Q14439 515 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 SPHARQ15513 63 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 ZNF648Q5T619 568 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 SLC22A10Q63ZE4 541 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 OR52W1Q6IF63 320 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 GPAT2Q6NUI2 795 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 RICTORQ6R327 1708 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 DMRTC2Q8IXT2 367 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 NIPA2Q8N8Q9 360 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 OR2G2Q8NGZ5 317 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 OR56B4Q8NH76 319 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 MOCOSQ96EN8 888 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 ATXN3LQ9H3M9 355 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 RGCCQ9H4X1 137 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 MAGIXQ9H6Y5 334 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 TMEM161AQ9NX61 479 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 MS4A12Q9NXJ0 267 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 VNN3Q9NY84 501 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 PCDHB8Q9UN66 801 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 SPIN1Q9Y657 262 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 PHRF1Q9P1Y6 1649 aaKnown RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 M0R082 166 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 SMAD9O15198 467 aaKnown RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 PRKYO43930 277 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 NTSR2O95665 410 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 TXNDC12O95881 172 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 PTHP01270 115 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 LINC00614P0C842 121 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 LINC00032P0C843 101 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 GGT1P19440 569 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 PRDX5P30044 214 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 MIPP30301 263 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 NRLP54845 237 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 ADPRHP54922 357 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 SEC61A1P61619 476 aaKnown RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 EMX2Q04743 252 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 HTR4Q13639 388 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 SERTAD2Q14140 314 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 LAPTM4AQ15012 233 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 ZNF79Q15937 498 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 PTCHD3Q3KNS1 767 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 FNDC3BQ53EP0 1204 aaKnown RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 USP39Q53GS9 565 aaKnown RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 MANEAQ5SRI9 462 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 GCNT6Q5T4J0 391 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 IDNKQ5T6J7 187 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 DHRS7BQ6IAN0 325 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 LPCAT3Q6P1A2 487 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 NCEH1Q6PIU2 408 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 ZC3H14Q6PJT7 736 aaKnown RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 C16orf54Q6UWD8 224 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 PEG10Q86TG7 708 aaKnown RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 RANBP3LQ86VV4 465 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 PUSL1Q8N0Z8 303 aaKnown RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 PELI3Q8N2H9 469 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 HDDC3Q8N4P3 179 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 OR56A3Q8NH54 315 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 CREB3L4Q8TEY5 395 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 RXFP2Q8WXD0 754 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 GGHQ92820 318 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 UBXN10Q96LJ8 280 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 NOL4LQ96MY1 436 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 SPSB2Q99619 263 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 ALG8Q9BVK2 526 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 ACTL8Q9H568 366 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 RIOX1Q9H6W3 641 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 ZFP64Q9NPA5 681 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 CDH10Q9Y6N8 788 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 TMEM131LA2VDJ0 1609 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 TCRBV5S2A0A599 114 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 TMEM218A2RU14 115 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 M0R2N6 131 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 MBTPS2O43462 519 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 GGCTO75223 188 aaKnown RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 VIPP01282 170 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 ASGR1P07306 291 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 CTSHP09668 335 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 G6PDP11413 515 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 CTPS1P17812 591 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 ARRB2P32121 409 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 CD68P34810 354 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 AFF3P51826 1226 aaKnown RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 TNFRSF9Q07011 255 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 SNTB2Q13425 540 aaKnown RBP5.48□□□□□ -1.53
SCN1A-216ENST00000637968 IRF3Q14653 427 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 GTDC1Q4AE62 458 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 SPIN4Q56A73 249 aa5.48□□□□□ -1.53
SCN1A-216ENST00000637968 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms