RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 SPPL2CQ8IUH8 684 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 ZZZ3Q8IYH5 903 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 C10orf111Q8N326 155 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 OR52E4Q8NGH9 312 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 OR9A2Q8NGT5 310 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 ZNF675Q8TD23 568 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 SLC26A7Q8TE54 656 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.04□□□□□ -0.64
CLN6-223ENST00000637823 POP5Q969H6 163 aaKnown RBP11.04□□□□□ -0.64
CLN6-223ENST00000637823 CLIP3Q96DZ5 547 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 RBM18Q96H35 190 aaKnown RBP11.04□□□□□ -0.64
CLN6-223ENST00000637823 CMKLR1Q99788 373 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 ALOXE3Q9BYJ1 711 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 LANCL2Q9NS86 450 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 ZCCHC3Q9NUD5 404 aaKnown RBP11.04□□□□□ -0.64
CLN6-223ENST00000637823 GPATCH2Q9NW75 528 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 THUMPD1Q9NXG2 353 aaKnown RBP11.04□□□□□ -0.64
CLN6-223ENST00000637823 SLC39A1Q9NY26 324 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 TRPC4Q9UBN4 977 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 ACSL6Q9UKU0 697 aa11.04□□□□□ -0.64
CLN6-223ENST00000637823 A0A087WV62 115 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 TCRBV3S1A0A5B6 114 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 AGRPO00253 132 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 CXCR6O00574 342 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 HYAL3O43820 417 aaPredicted RBP11.03□□□□□ -0.64
CLN6-223ENST00000637823 OR10H2O60403 315 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 PLOD3O60568 738 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 TIAF1O95411 115 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 C8BP07358 591 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 UMPSP11172 480 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 ETFAP13804 333 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 NCK1P16333 377 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 ATP6V1B2P21281 511 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 GALNSP34059 522 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 MC3RP41968 323 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 LIMK1P53667 647 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 MAPK10P53779 464 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 POLE2P56282 527 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 DSTNP60981 165 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 AP2B1P63010 937 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 BTG2P78543 158 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 DCDP81605 110 aaKnown RBP11.03□□□□□ -0.64
CLN6-223ENST00000637823 RHDQ02161 417 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 MAP4K2Q12851 820 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 TP53BP2Q13625 1128 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 VEZF1Q14119 521 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 LTB4RQ15722 352 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 VMACQ2NL98 169 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 PRICKLE4Q2TBC4 344 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 NKAIN1Q4KMZ8 207 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 ZNF628Q5EBL2 1059 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 GCNT6Q5T4J0 391 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 ARHGAP40Q5TG30 622 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 ZFP1Q6P2D0 407 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 TMEM107Q6UX40 140 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 SLC30A8Q8IWU4 369 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 ST13P4Q8IZP2 240 aaPredicted RBP11.03□□□□□ -0.64
CLN6-223ENST00000637823 SLC38A9Q8NBW4 561 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 C11orf65Q8NCR3 313 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 NUP43Q8NFH3 380 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 ADCY4Q8NFM4 1077 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 MIPOL1Q8TD10 442 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 KAT2AQ92830 837 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 DUS3LQ96G46 650 aaKnown RBP11.03□□□□□ -0.64
CLN6-223ENST00000637823 RSRC1Q96IZ7 334 aaKnown RBP11.03□□□□□ -0.64
CLN6-223ENST00000637823 MAGED4Q96JG8 741 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 SLC35G5Q96KT7 338 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 NSMCE2Q96MF7 247 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 PELOQ9BRX2 385 aaKnown RBP11.03□□□□□ -0.64
CLN6-223ENST00000637823 TGIF2Q9GZN2 237 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 TMEM38AQ9H6F2 299 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 S100A14Q9HCY8 104 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 APMAPQ9HDC9 416 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 RAPGEFL1Q9UHV5 662 aa11.03□□□□□ -0.64
CLN6-223ENST00000637823 FAF1Q9UNN5 650 aaPredicted RBP11.03□□□□□ -0.64
CLN6-223ENST00000637823 C19orf53Q9UNZ5 99 aaPredicted RBP11.03□□□□□ -0.64
CLN6-223ENST00000637823 EP300Q09472 2414 aaPredicted RBP11.03□□□□□ -0.64
CLN6-223ENST00000637823 MUC6Q6W4X9 2439 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 MYOCOSA0A1B0GUC4 107 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 SYNDIG1LA6NDD5 238 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 CPNE3O75131 537 aaKnown RBP11.02□□□□□ -0.65
CLN6-223ENST00000637823 CREG1O75629 220 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 KRT36O76013 467 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 MT-CO3P00414 261 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 CCL4P13236 92 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 NT5EP21589 574 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 MATN1P21941 496 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 PTGER1P34995 402 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 PCGF2P35227 344 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 RORAP35398 523 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 SOX11P35716 441 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 STT3AP46977 705 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 ERFP50548 548 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 PRKAG1P54619 331 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 CASP9P55211 416 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 OCA2Q04671 838 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 MGAT2Q10469 447 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 ISXQ2M1V0 245 aa11.02□□□□□ -0.65
CLN6-223ENST00000637823 ZNF630Q2M218 657 aaPredicted RBP11.02□□□□□ -0.65
CLN6-223ENST00000637823 FHL5Q5TD97 284 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms