RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 RHBDD2Q6NTF9 364 aa14.42□□□□□ -0.1
CLN6-219ENST00000637329 RNF130Q86XS8 419 aa14.42□□□□□ -0.1
CLN6-219ENST00000637329 SPPL2CQ8IUH8 684 aa14.42□□□□□ -0.1
CLN6-219ENST00000637329 CCDC116Q8IYX3 515 aa14.42□□□□□ -0.1
CLN6-219ENST00000637329 METTL25Q8N6Q8 603 aa14.42□□□□□ -0.1
CLN6-219ENST00000637329 FIG4Q92562 907 aa14.42□□□□□ -0.1
CLN6-219ENST00000637329 FAM162AQ96A26 154 aa14.42□□□□□ -0.1
CLN6-219ENST00000637329 TBC1D20Q96BZ9 403 aa14.42□□□□□ -0.1
CLN6-219ENST00000637329 SLC35G5Q96KT7 338 aa14.42□□□□□ -0.1
CLN6-219ENST00000637329 PELOQ9BRX2 385 aaKnown RBP14.42□□□□□ -0.1
CLN6-219ENST00000637329 A4GALTQ9NPC4 353 aa14.42□□□□□ -0.1
CLN6-219ENST00000637329 CCM2LQ9NUG4 571 aaPredicted RBP14.42□□□□□ -0.1
CLN6-219ENST00000637329 GPATCH2Q9NW75 528 aa14.42□□□□□ -0.1
CLN6-219ENST00000637329 NKX1-2Q9UD57 310 aaPredicted RBP14.42□□□□□ -0.1
CLN6-219ENST00000637329 MAP4K5Q9Y4K4 846 aa14.42□□□□□ -0.1
CLN6-219ENST00000637329 A0A087WV62 115 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 DNAJB6O75190 326 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 CREG1O75629 220 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 HBQ1P09105 142 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 SLC35E2P0CK97 266 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 C8orf89P0DMQ9 161 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 ARAFP10398 606 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 FCGR1AP12314 374 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 ETFAP13804 333 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 FBLP22087 321 aaKnown RBP14.41□□□□□ -0.1
CLN6-219ENST00000637329 GCKP35557 465 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 ERFP50548 548 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 DSTNP60981 165 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 ZFP36L1Q07352 338 aaKnown RBP14.41□□□□□ -0.1
CLN6-219ENST00000637329 TP53BP2Q13625 1128 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 ELOAQ14241 798 aaKnown RBP14.41□□□□□ -0.1
CLN6-219ENST00000637329 COX20Q5RI15 118 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 TMEM107Q6UX40 140 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 PRR23CQ6ZRP0 262 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 TTLL10Q6ZVT0 673 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 C6orf120Q7Z4R8 191 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 ADGRG5Q8IZF4 528 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 CLEC4FQ8N1N0 589 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 PQLC1Q8N2U9 271 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 PAPD5Q8NDF8 572 aaKnown RBP14.41□□□□□ -0.1
CLN6-219ENST00000637329 TMEM52Q8NDY8 209 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 OR9A2Q8NGT5 310 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 MS4A4EQ96PG1 132 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 CDC6Q99741 560 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 SEMA4GQ9NTN9 838 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 ANAPC2Q9UJX6 822 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 RARRES3Q9UL19 164 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 SAMD4AQ9UPU9 718 aaKnown RBP14.41□□□□□ -0.1
CLN6-219ENST00000637329 ANGPT4Q9Y264 503 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 MMACHCQ9Y4U1 282 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 AP4S1Q9Y587 144 aa14.41□□□□□ -0.1
CLN6-219ENST00000637329 NUP210LQ5VU65 1888 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 WASHC1A8K0Z3 465 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 CASC3O15234 703 aaKnown RBP14.4□□□□□ -0.1
CLN6-219ENST00000637329 ASNA1O43681 348 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 CTNSO60931 367 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 C1QCP02747 245 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 CCKBRP32239 447 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 CSTF2P33240 577 aaKnown RBP eCLIP14.4□□□□□ -0.1
CLN6-219ENST00000637329 MC3RP41968 323 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 XCR1P46094 333 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 PRIM2P49643 509 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 IL11RAQ14626 422 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 ZNF750Q32MQ0 723 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 ZNF628Q5EBL2 1059 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 PHF19Q5T6S3 580 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 ST13P4Q8IZP2 240 aaPredicted RBP14.4□□□□□ -0.1
CLN6-219ENST00000637329 LGI4Q8N135 537 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 OR2L13Q8N349 312 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 AGBL5Q8NDL9 886 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 OR51Q1Q8NH59 317 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 CANT1Q8WVQ1 401 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 ANKRD9Q96BM1 317 aaPredicted RBP14.4□□□□□ -0.1
CLN6-219ENST00000637329 ELP4Q96EB1 424 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 PEX11GQ96HA9 241 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 OR6C1Q96RD1 312 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 UGT2B28Q9BY64 529 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 MAGIXQ9H6Y5 334 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 ZNF304Q9HCX3 659 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 PRTFDC1Q9NRG1 225 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 DCAF13Q9NV06 445 aaKnown RBP14.4□□□□□ -0.1
CLN6-219ENST00000637329 DDX18Q9NVP1 670 aaKnown RBP14.4□□□□□ -0.1
CLN6-219ENST00000637329 RPS6KA6Q9UK32 745 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 PRDM4Q9UKN5 801 aa14.4□□□□□ -0.1
CLN6-219ENST00000637329 GOLGA4Q13439 2230 aaKnown RBP14.39□□□□□ -0.11
CLN6-219ENST00000637329 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.39□□□□□ -0.11
CLN6-219ENST00000637329 A0A1W2PS29 197 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 TMEM247A6NEH6 219 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 CASQ2O14958 399 aaPredicted RBP14.39□□□□□ -0.11
CLN6-219ENST00000637329 HNRNPRO43390 633 aaKnown RBP14.39□□□□□ -0.11
CLN6-219ENST00000637329 PLOD3O60568 738 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 B4GALT2O60909 372 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 CBFA2T3O75081 653 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 LDB3O75112 727 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 FGF5P12034 268 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 GALNSP34059 522 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 MAT1AQ00266 395 aaKnown RBP14.39□□□□□ -0.11
CLN6-219ENST00000637329 EEF1A2Q05639 463 aaKnown RBP14.39□□□□□ -0.11
CLN6-219ENST00000637329 SCARB2Q14108 478 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 SERTAD2Q14140 314 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms