RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 TLR4O00206 839 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 HAT1O14929 419 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 EMC8O43402 210 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 ERAL1O75616 437 aaKnown RBP11.46□□□□□ -0.57
CLN8-212ENST00000637083 RECKO95980 971 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 OCM2P0CE71 109 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 OCMP0CE72 109 aaPredicted RBP11.46□□□□□ -0.57
CLN8-212ENST00000637083 C21orf33P30042 268 aaPredicted RBP11.46□□□□□ -0.57
CLN8-212ENST00000637083 IFNA8P32881 189 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 TGFBR2P37173 567 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 RPS15AP62244 130 aaKnown RBP11.46□□□□□ -0.57
CLN8-212ENST00000637083 SNRPGP62308 76 aaKnown RBP11.46□□□□□ -0.57
CLN8-212ENST00000637083 LSM3P62310 102 aaKnown RBP11.46□□□□□ -0.57
CLN8-212ENST00000637083 RGS1Q08116 209 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 USP30Q70CQ3 517 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 AMIGO1Q86WK6 493 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 SAMD14Q8IZD0 417 aaPredicted RBP11.46□□□□□ -0.57
CLN8-212ENST00000637083 MINDY2Q8NBR6 621 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 NDNFQ8TB73 568 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 FGF14Q92915 247 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 RIPOR3Q96MK2 946 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 FNDC11Q9BVV2 318 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 CDCA4Q9BXL8 241 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 MKRN2Q9H000 416 aaKnown RBP11.46□□□□□ -0.57
CLN8-212ENST00000637083 NKX2-4Q9H2Z4 354 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 SLC6A20Q9NP91 592 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 PRDM8Q9NQV8 689 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 RHCGQ9UBD6 479 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 LIPT1Q9Y234 373 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 ZNF780BQ9Y6R6 833 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 A3GALT2U3KPV4 340 aa11.46□□□□□ -0.57
CLN8-212ENST00000637083 CKAP5Q14008 2032 aa11.46□□□□□ -0.58
CLN8-212ENST00000637083 A0A0G2JN53 185 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 TRBV4-1A0A0J9YWV2 114 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 PRSS38A1L453 326 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 FFAR1O14842 300 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 LATO43561 262 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 ASNA1O43681 348 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 B4GALT2O60909 372 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 STSP08842 583 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 HOXB2P14652 356 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 POU1F1P28069 291 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 SLC19A1P41440 591 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 RANBP1P43487 201 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 ALDH6A1Q02252 535 aaKnown RBP11.45□□□□□ -0.58
CLN8-212ENST00000637083 ITGADQ13349 1161 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 MAPK11Q15759 364 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 SYPL1Q16563 259 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 ANKDD1AQ495B1 522 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 TMEM196Q5HYL7 178 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 MEDAGQ5VYS4 303 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 SLX4IPQ5VYV7 408 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 SLC48A1Q6P1K1 146 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 SLC46A3Q7Z3Q1 461 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 AMER2Q8N7J2 671 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 AMER3Q8N944 861 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 OR6Q1Q8NGQ2 317 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 OR8K5Q8NH50 307 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 VANGL1Q8TAA9 524 aaPredicted RBP11.45□□□□□ -0.58
CLN8-212ENST00000637083 LCN9Q8WX39 176 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 ABHD8Q96I13 439 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 PINK1Q9BXM7 581 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 POLR2J3Q9H1A7 115 aaKnown RBP11.45□□□□□ -0.58
CLN8-212ENST00000637083 MMP27Q9H306 513 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 KLHL31Q9H511 634 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 AMBNQ9NP70 447 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 AKIP1Q9NQ31 210 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 GPR83Q9NYM4 423 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 NDOR1Q9UHB4 597 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 OSGIN1Q9UJX0 560 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 PLEKHM1Q9Y4G2 1056 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 KLK4Q9Y5K2 254 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 A0A1W2PRQ8 180 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 URADA6NGE7 173 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 J3QRK9 145 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 ZW10O43264 779 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 ACADMP11310 421 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 GSTM3P21266 225 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 CNR2P34972 360 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 IFNGR2P38484 337 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 SOX9P48436 509 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 XKP51811 444 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 MLLT10P55197 1068 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 NCS1P62166 190 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 HYAL2Q12891 473 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 IRF3Q14653 427 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 RAB30Q15771 203 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 SYT16Q17RD7 645 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 TJAP1Q5JTD0 557 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 ZNF425Q6IV72 752 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 KIAA1211LQ6NV74 962 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 DCDC5Q6ZRR9 648 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 ZNF554Q86TJ5 538 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 IGFN1Q86VF2 1251 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 NRROSQ86YC3 692 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 B3GNT7Q8NFL0 401 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 GAL3ST3Q96A11 431 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 DCSTAMPQ9H295 470 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 SLC13A4Q9UKG4 626 aa11.45□□□□□ -0.58
CLN8-212ENST00000637083 FBXW2Q9UKT8 454 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms