RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 TRHRP34981 398 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 SLC37A1P57057 533 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 MAP4K2Q12851 820 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 TUBA3CQ13748 450 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 PRICKLE4Q2TBC4 344 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 ZNF750Q32MQ0 723 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 PLEKHN1Q494U1 663 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 TUBA3EQ6PEY2 450 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 RNF111Q6ZNA4 994 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 PRICKLE2Q7Z3G6 844 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 TICAM1Q8IUC6 712 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 HORMAD2Q8N7B1 307 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 FNDC5Q8NAU1 212 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 SUN3Q8TAQ9 357 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 ZNF675Q8TD23 568 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 ZNF75CPQ92670 426 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 EXOSC8Q96B26 276 aaKnown RBP13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 CTHRC1Q96CG8 243 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 ERP27Q96DN0 273 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 MTERF3Q96E29 417 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 EGLN2Q96KS0 407 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 EPN3Q9H201 632 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 TRIM45Q9H8W5 580 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 MEAF6Q9HAF1 191 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 PNPOQ9NVS9 261 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 ASIC5Q9NY37 505 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 PLA2G3Q9NZ20 509 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 NOP53Q9NZM5 478 aaKnown RBP13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 EXO1Q9UQ84 846 aaKnown RBP13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 PCDHGB6Q9Y5F9 930 aa13.7□□□□□ -0.22
CDC42BPB-209ENST00000634889 TMEM200CA6NKL6 621 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 TRPC5OSA6NMA1 111 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 HRKO00198 91 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 HDAC3O15379 428 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 SLC28A2O43868 658 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 PRKNO60260 465 aaPredicted RBP13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 ITGA10O75578 1167 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 SLITRK5O94991 958 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 CLPSP04118 112 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 PRPS2P11908 318 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 DDX5P17844 614 aaKnown RBP13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 RPL3P39023 403 aaKnown RBP13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 CD96P40200 585 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 SSR4P51571 173 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 EMX2Q04743 252 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 DUSP2Q05923 314 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 PDE7AQ13946 482 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 INAQ16352 499 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 MPEG1Q2M385 716 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 RPUSD3Q6P087 351 aaKnown RBP13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 SLC29A4Q7RTT9 530 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 ZNF605Q86T29 641 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 C9orf40Q8IXQ3 194 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 GPALPP1Q8IXQ4 340 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 MDS2Q8NDY4 140 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 CATSPER1Q8NEC5 780 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 LRRC8CQ8TDW0 803 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 THAP3Q8WTV1 239 aaPredicted RBP13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 DYDC1Q8WWB3 177 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 TSSK3Q96PN8 268 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 NUF2Q9BZD4 464 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 REEP4Q9H6H4 257 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 INTS9Q9NV88 658 aaKnown RBP13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 MAT2BQ9NZL9 334 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 GIMAP2Q9UG22 337 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 ZNF639Q9UID6 485 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 EIF3LQ9Y262 564 aaKnown RBP13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 PCDHGA10Q9Y5H3 936 aa13.69□□□□□ -0.22
CDC42BPB-209ENST00000634889 MYO1GB0I1T2 1018 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 PRAMEF2O60811 474 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 OR2J2O76002 312 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 F10P00742 488 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 CT62P0C5K7 136 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 S1PR1P21453 382 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 NTSP30990 170 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 SSTR4P31391 388 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 CYB561P49447 251 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 HLCSP50747 726 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 MGAT2Q10469 447 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 EBPQ15125 230 aaKnown RBP13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 OR1C1Q15619 314 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 IL23RQ5VWK5 629 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 FAM180BQ6P0A1 224 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 R3HCC1LQ7Z5L2 792 aaKnown RBP13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 CCDC116Q8IYX3 515 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 FAM9CQ8IZT9 166 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 LIX1Q8N485 282 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 ZNF615Q8N8J6 731 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 PIWIL2Q8TC59 973 aaKnown RBP13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 PPCDCQ96CD2 204 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 C7orf26Q96N11 449 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 BBS4Q96RK4 519 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 BRINP2Q9C0B6 783 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 WWTR1Q9GZV5 400 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 OR10A5Q9H207 317 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 AKTIPQ9H8T0 292 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 BAIAP2L1Q9UHR4 511 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 CFL2Q9Y281 166 aa13.68□□□□□ -0.22
CDC42BPB-209ENST00000634889 SPTA1P02549 2419 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 389.7 ms