RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 HP1BP3Q5SSJ5 553 aaPredicted RBP18.38■□□□□ 0.53
TARDBP-228ENST00000629725 FNDC7Q5VTL7 733 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 TMEM64Q6YI46 380 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 ZNF662Q6ZS27 426 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 ZC3HC1Q86WB0 502 aaKnown RBP18.38■□□□□ 0.53
TARDBP-228ENST00000629725 ZNF473Q8WTR7 871 aaKnown RBP18.38■□□□□ 0.53
TARDBP-228ENST00000629725 ESAMQ96AP7 390 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 NTNG2Q96CW9 530 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 ZFP3Q96NJ6 502 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 ANGPTL4Q9BY76 406 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 ADAM21Q9UKJ8 722 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 EXPH5Q8NEV8 1989 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 MED12LQ86YW9 2145 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 MED12Q93074 2177 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 SAP18O00422 153 aaKnown RBP18.37■□□□□ 0.53
TARDBP-228ENST00000629725 DNALI1O14645 258 aaPredicted RBP18.37■□□□□ 0.53
TARDBP-228ENST00000629725 OR10H2O60403 315 aa18.37■□□□□ 0.53
TARDBP-228ENST00000629725 STK16O75716 305 aa18.37■□□□□ 0.53
TARDBP-228ENST00000629725 TLX1P31314 330 aaPredicted RBP18.37■□□□□ 0.53
TARDBP-228ENST00000629725 SLCO1A2P46721 670 aa18.37■□□□□ 0.53
TARDBP-228ENST00000629725 NAGLUP54802 743 aa18.37■□□□□ 0.53
TARDBP-228ENST00000629725 IRF8Q02556 426 aa18.37■□□□□ 0.53
TARDBP-228ENST00000629725 PPP1R7Q15435 360 aa18.37■□□□□ 0.53
TARDBP-228ENST00000629725 C18orf63Q68DL7 685 aa18.37■□□□□ 0.53
TARDBP-228ENST00000629725 SPPL2AQ8TCT8 520 aa18.37■□□□□ 0.53
TARDBP-228ENST00000629725 RIT1Q92963 219 aa18.37■□□□□ 0.53
TARDBP-228ENST00000629725 SECISBP2Q96T21 854 aaKnown RBP18.37■□□□□ 0.53
TARDBP-228ENST00000629725 NAP1L3Q99457 506 aaPredicted RBP18.37■□□□□ 0.53
TARDBP-228ENST00000629725 PELOQ9BRX2 385 aaKnown RBP18.37■□□□□ 0.53
TARDBP-228ENST00000629725 TEX10Q9NXF1 929 aaPredicted RBP18.37■□□□□ 0.53
TARDBP-228ENST00000629725 NPFFR2Q9Y5X5 522 aa18.37■□□□□ 0.53
TARDBP-228ENST00000629725 PSAT1Q9Y617 370 aa18.37■□□□□ 0.53
TARDBP-228ENST00000629725 C2orf92A0A1B0GVN3 265 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 TRIM64A6NGJ6 449 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 TRIM64BA6NI03 449 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 DSCAMO60469 2012 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 RCBTB2O95199 551 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 ACTL6AO96019 429 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 PCNAP12004 261 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 SOX18P35713 384 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 ELK3P41970 407 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 TMED10P49755 219 aaKnown RBP18.36■□□□□ 0.53
TARDBP-228ENST00000629725 TNFRSF17Q02223 184 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 CHIT1Q13231 466 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 OR4C11Q6IEV9 310 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 SULT1C3Q6IMI6 304 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 GPR180Q86V85 440 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 SLC44A1Q8WWI5 657 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 TP53INP1Q96A56 240 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 PERPQ96FX8 193 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 CCL19Q99731 98 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 TM9SF2Q99805 663 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 SORBS1Q9BX66 1292 aaKnown RBP18.36■□□□□ 0.53
TARDBP-228ENST00000629725 DERL2Q9GZP9 239 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 SNX15Q9NRS6 342 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 C6orf203Q9P0P8 240 aaPredicted RBP18.36■□□□□ 0.53
TARDBP-228ENST00000629725 PHF11Q9UIL8 331 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 CHMP2BQ9UQN3 213 aa18.36■□□□□ 0.53
TARDBP-228ENST00000629725 PRKRAO75569 313 aaKnown RBP18.35■□□□□ 0.53
TARDBP-228ENST00000629725 CLPSP04118 112 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 FPR1P21462 350 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 BUD31P41223 144 aaPredicted RBP18.35■□□□□ 0.53
TARDBP-228ENST00000629725 CASP3P42574 277 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 CASP2P42575 452 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 FNTAP49354 379 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 DIO3P55073 304 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 RPP38P78345 283 aaKnown RBP18.35■□□□□ 0.53
TARDBP-228ENST00000629725 PCDH1Q08174 1060 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 TBCCQ15814 346 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 CDKL4Q5MAI5 379 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 KHDRBS2Q5VWX1 349 aaKnown RBP18.35■□□□□ 0.53
TARDBP-228ENST00000629725 GPSM1Q86YR5 675 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 ZNF441Q8N8Z8 693 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 FAM83FQ8NEG4 500 aaPredicted RBP18.35■□□□□ 0.53
TARDBP-228ENST00000629725 UBE2E3Q969T4 207 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 INTS12Q96CB8 462 aaKnown RBP18.35■□□□□ 0.53
TARDBP-228ENST00000629725 CMTM7Q96FZ5 175 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 TMEM41AQ96HV5 264 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 PBKQ96KB5 322 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 TUBA1CQ9BQE3 449 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 PIGMQ9H3S5 423 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 POPDC3Q9HBV1 291 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 FETUBQ9UGM5 382 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 ASIC3Q9UHC3 531 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 TRPS1Q9UHF7 1281 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 TESMINQ9Y4I5 508 aa18.35■□□□□ 0.53
TARDBP-228ENST00000629725 A8MXE2 369 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 GNB5O14775 395 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 CCNT2O60583 730 aaKnown RBP18.34■□□□□ 0.53
TARDBP-228ENST00000629725 GPR75O95800 540 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 CPN1P15169 458 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 EPORP19235 508 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 PTPN6P29350 595 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 GCKP35557 465 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 CPOXP36551 454 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 NRG3P56975 720 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 ACKR1Q16570 336 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 HLA-DQA1Q5Y7H0 255 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 STEAP4Q687X5 459 aa18.34■□□□□ 0.53
TARDBP-228ENST00000629725 TIGD3Q6B0B8 471 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms