RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 SSTR4P31391 388 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 FBXW4P57775 412 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 GPX6P59796 221 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 PHEXP78562 749 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 PCDH1Q08174 1060 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 TOMM20Q15388 145 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 KBTBD12Q3ZCT8 623 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 ACSF3Q4G176 576 aaPredicted RBP17.4■□□□□ 0.38
SMN2-215ENST00000628696 FLYWCH1Q4VC44 716 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 FBXW10Q5XX13 1052 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 HLA-DQA1Q5Y7H0 255 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 BICRALQ6AI39 1079 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 CYS1Q717R9 158 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 FAM222BQ8WU58 562 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 RNASE6Q93091 150 aaKnown RBP17.4■□□□□ 0.38
SMN2-215ENST00000628696 UCN3Q969E3 161 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 ERP44Q9BS26 406 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 IGSF5Q9NSI5 407 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 WHRNQ9P202 907 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 MTRF1LQ9UGC7 380 aaKnown RBP17.4■□□□□ 0.38
SMN2-215ENST00000628696 CAMK2AQ9UQM7 478 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 ASB4Q9Y574 426 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 TMPRSS11DO60235 418 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 IL2RAP01589 272 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 GSTA2P09210 222 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 CEACAM8P31997 349 aaPredicted RBP17.39■□□□□ 0.37
SMN2-215ENST00000628696 BSGP35613 385 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 MASP1P48740 699 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 CRYZQ08257 329 aaKnown RBP17.39■□□□□ 0.37
SMN2-215ENST00000628696 CPSF6Q16630 551 aaKnown RBP eCLIP17.39■□□□□ 0.37
SMN2-215ENST00000628696 TBCELQ5QJ74 424 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 LIPJQ5W064 366 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 MRM1Q6IN84 353 aaKnown RBP17.39■□□□□ 0.37
SMN2-215ENST00000628696 MAATS1Q7Z4T9 603 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 RILPQ96NA2 401 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 TIMP4Q99727 224 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 SH3GL2Q99962 352 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 EPB41L4BQ9H329 900 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 ACOT9Q9Y305 439 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 SLC6A5Q9Y345 797 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 KIAA1549Q9HCM3 1950 aa17.39■□□□□ 0.37
SMN2-215ENST00000628696 A0A0A6YYD5 115 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 SYCE1LA8MT33 242 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 AIFM1O95831 613 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 GBAP04062 536 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 CLPSP04118 112 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 SLC35E2P0CK97 266 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 MTHFD2P13995 350 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 GFAPP14136 432 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 TACR1P25103 407 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 NEK2P51955 445 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 FOXD4Q12950 439 aaPredicted RBP17.38■□□□□ 0.37
SMN2-215ENST00000628696 RPS6KA2Q15349 733 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 PFKFB4Q16877 469 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 PACS2Q86VP3 889 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 CCDC25Q86WR0 208 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 LACC1Q8IV20 430 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 KCTD4Q8WVF5 259 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 REPS1Q96D71 796 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 GNRHR2Q96P88 292 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 ZNF717Q9BY31 904 aaPredicted RBP17.38■□□□□ 0.37
SMN2-215ENST00000628696 DDX31Q9H8H2 851 aaKnown RBP17.38■□□□□ 0.37
SMN2-215ENST00000628696 SNX15Q9NRS6 342 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 CBLCQ9ULV8 474 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 TSC22D4Q9Y3Q8 395 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 NPFFR2Q9Y5X5 522 aa17.38■□□□□ 0.37
SMN2-215ENST00000628696 ZNF469Q96JG9 3925 aaPredicted RBP17.37■□□□□ 0.37
SMN2-215ENST00000628696 A0A1W2PS29 197 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 ANKRD33BA6NCL7 494 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 FAM187AA6NFU0 413 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 LRRC14BA6NHZ5 514 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 PIK3R1P27986 724 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 GALNSP34059 522 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 TIMP3P35625 211 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 CDK9P50750 372 aaKnown RBP17.37■□□□□ 0.37
SMN2-215ENST00000628696 AGFG1P52594 562 aaKnown RBP17.37■□□□□ 0.37
SMN2-215ENST00000628696 ARFIP1P53367 373 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 SF3B4Q15427 424 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMN2-215ENST00000628696 PM20D2Q8IYS1 436 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 PRR22Q8IZ63 422 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 SPPL2AQ8TCT8 520 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 FBF1Q8TES7 1133 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 TP53INP1Q96A56 240 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 HSPBAP1Q96EW2 488 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 DOCK7Q96N67 2140 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 TRIB1Q96RU8 372 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 CXorf21Q9HAI6 301 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 RYDENQ9NUL5 291 aaKnown RBP17.37■□□□□ 0.37
SMN2-215ENST00000628696 TEX10Q9NXF1 929 aaPredicted RBP17.37■□□□□ 0.37
SMN2-215ENST00000628696 RNF14Q9UBS8 474 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 ZNF629Q9UEG4 869 aaPredicted RBP17.37■□□□□ 0.37
SMN2-215ENST00000628696 EXPH5Q8NEV8 1989 aa17.37■□□□□ 0.37
SMN2-215ENST00000628696 MED12Q93074 2177 aa17.36■□□□□ 0.37
SMN2-215ENST00000628696 TUBAL3A6NHL2 446 aa17.36■□□□□ 0.37
SMN2-215ENST00000628696 H0YIV9 168 aa17.36■□□□□ 0.37
SMN2-215ENST00000628696 PGRMC2O15173 223 aa17.36■□□□□ 0.37
SMN2-215ENST00000628696 RAD51CO43502 376 aa17.36■□□□□ 0.37
SMN2-215ENST00000628696 SNX4O95219 450 aa17.36■□□□□ 0.37
SMN2-215ENST00000628696 HPNP05981 417 aa17.36■□□□□ 0.37
SMN2-215ENST00000628696 ARL1P40616 181 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms