RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 HRKO00198 91 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 PCDH7O60245 1069 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 SLC19A2O60779 497 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 UROSP10746 265 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 CA7P43166 264 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 SRSF11Q05519 484 aaKnown RBP20.67■□□□□ 0.9
SF1-220ENST00000626028 MAP4K2Q12851 820 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 EBPQ15125 230 aaKnown RBP20.67■□□□□ 0.9
SF1-220ENST00000626028 ZNF791Q3KP31 576 aaPredicted RBP20.67■□□□□ 0.9
SF1-220ENST00000626028 GK5Q6ZS86 529 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 RNF165Q6ZSG1 346 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 OR2W6PQ8NHA6 318 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 MAGED4Q96JG8 741 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 EHD3Q9NZN3 535 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 SENP1Q9P0U3 644 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 PLEKHB1Q9UF11 243 aaPredicted RBP20.67■□□□□ 0.9
SF1-220ENST00000626028 NPIPA1Q9UND3 350 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 CFL2Q9Y281 166 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 TIMM22Q9Y584 194 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 ZNF780BQ9Y6R6 833 aa20.67■□□□□ 0.9
SF1-220ENST00000626028 NCOA6Q14686 2063 aaPredicted RBP20.66■□□□□ 0.9
SF1-220ENST00000626028 GNG14A0A1W2PPG7 69 aa20.66■□□□□ 0.9
SF1-220ENST00000626028 CAPN14A8MX76 684 aa20.66■□□□□ 0.9
SF1-220ENST00000626028 TFECO14948 347 aaPredicted RBP20.66■□□□□ 0.9
SF1-220ENST00000626028 TRIM13O60858 407 aa20.66■□□□□ 0.9
SF1-220ENST00000626028 CRCPO75575 148 aa20.66■□□□□ 0.9
SF1-220ENST00000626028 CNR1P21554 472 aa20.66■□□□□ 0.9
SF1-220ENST00000626028 SERPINB3P29508 390 aa20.66■□□□□ 0.9
SF1-220ENST00000626028 TIA1P31483 386 aaKnown RBP eCLIP20.66■□□□□ 0.92e-8■■■■□ 24.3
SF1-220ENST00000626028 TAGAPQ8N103 731 aa20.66■□□□□ 0.9
SF1-220ENST00000626028 UCN3Q969E3 161 aa20.66■□□□□ 0.9
SF1-220ENST00000626028 ERP27Q96DN0 273 aa20.66■□□□□ 0.9
SF1-220ENST00000626028 FAM173AQ9BQD7 235 aa20.66■□□□□ 0.9
SF1-220ENST00000626028 RRAGDQ9NQL2 400 aaPredicted RBP20.66■□□□□ 0.9
SF1-220ENST00000626028 SACM1LQ9NTJ5 587 aa20.66■□□□□ 0.9
SF1-220ENST00000626028 RAB21Q9UL25 225 aa20.66■□□□□ 0.9
SF1-220ENST00000626028 NPIPB8E9PQR5 432 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 RSL1D1O76021 490 aaKnown RBP20.65■□□□□ 0.9
SF1-220ENST00000626028 CLPSP04118 112 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 FBXO45P0C2W1 286 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 CHN1P15882 459 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 HTR6P50406 440 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 RAE1P78406 368 aaKnown RBP20.65■□□□□ 0.9
SF1-220ENST00000626028 PCLAFQ15004 111 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 RNFT1Q5M7Z0 435 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 MAMDC2Q7Z304 686 aaPredicted RBP20.65■□□□□ 0.9
SF1-220ENST00000626028 SPPL2CQ8IUH8 684 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 VWA5B2Q8N398 1253 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 ZNF615Q8N8J6 731 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 ZNF441Q8N8Z8 693 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 OR2M7Q8NG81 312 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 SPACA9Q96E40 222 aaPredicted RBP20.65■□□□□ 0.9
SF1-220ENST00000626028 KCNA7Q96RP8 456 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 SMC6Q96SB8 1091 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 PARD6BQ9BYG5 372 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 CNIH4Q9P003 139 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 SUCOQ9UBS9 1254 aaKnown RBP20.65■□□□□ 0.9
SF1-220ENST00000626028 DLGAP4Q9Y2H0 992 aa20.65■□□□□ 0.9
SF1-220ENST00000626028 C2orf92A0A1B0GVN3 265 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 ACOT7O00154 380 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 ZNF354AO60765 605 aaPredicted RBP20.64■□□□□ 0.89
SF1-220ENST00000626028 NADKO95544 446 aaPredicted RBP20.64■□□□□ 0.89
SF1-220ENST00000626028 P04436 131 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 RNF224P0DH78 156 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 NT5EP21589 574 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 TMED10P49755 219 aaKnown RBP20.64■□□□□ 0.89
SF1-220ENST00000626028 FOXA1P55317 472 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 HMGCS1Q01581 520 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 ZNF763Q0D2J5 394 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 IMPG1Q17R60 797 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 ERCC6LQ2NKX8 1250 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 PRICKLE4Q2TBC4 344 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 HLA-DQA1Q5Y7H0 255 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 SLC22A10Q63ZE4 541 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 PAOXQ6QHF9 649 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 C10orf107Q8IVU9 208 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 SRRM1Q8IYB3 904 aaKnown RBP20.64■□□□□ 0.89
SF1-220ENST00000626028 EID3Q8N140 333 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 LRRC25Q8N386 305 aaPredicted RBP20.64■□□□□ 0.89
SF1-220ENST00000626028 PAQR8Q8TEZ7 354 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 SREK1Q8WXA9 508 aaKnown RBP20.64■□□□□ 0.89
SF1-220ENST00000626028 CTHRC1Q96CG8 243 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 KLHL29Q96CT2 875 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 APIPQ96GX9 242 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 ZNF681Q96N22 645 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 GAL3ST4Q96RP7 486 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 OR10A5Q9H207 317 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 SH2D2AQ9NP31 389 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 PLSCR2Q9NRY7 297 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 DEPPQ9NTK1 212 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 ZNF639Q9UID6 485 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 UTS2RQ9UKP6 389 aa20.64■□□□□ 0.89
SF1-220ENST00000626028 TRGV8A0A0C4DH27 118 aa20.63■□□□□ 0.89
SF1-220ENST00000626028 ERAL1O75616 437 aaKnown RBP20.63■□□□□ 0.89
SF1-220ENST00000626028 BCAS2O75934 225 aaPredicted RBP20.63■□□□□ 0.89
SF1-220ENST00000626028 S1PR1P21453 382 aa20.63■□□□□ 0.89
SF1-220ENST00000626028 PRPH2P23942 346 aa20.63■□□□□ 0.89
SF1-220ENST00000626028 SSTR4P31391 388 aa20.63■□□□□ 0.89
SF1-220ENST00000626028 SERPINB5P36952 375 aa20.63■□□□□ 0.89
SF1-220ENST00000626028 HYAL4Q2M3T9 481 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms