RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 NTN4Q9HB63 628 aa3.09□□□□□ -1.91
TCF4-250ENST00000625849 RPRD1BQ9NQG5 326 aaKnown RBP3.09□□□□□ -1.91
TCF4-250ENST00000625849 PCDHB16Q9NRJ7 776 aa3.09□□□□□ -1.91
TCF4-250ENST00000625849 ACOXLQ9NUZ1 547 aa3.09□□□□□ -1.91
TCF4-250ENST00000625849 MED9Q9NWA0 146 aa3.09□□□□□ -1.91
TCF4-250ENST00000625849 SMOXQ9NWM0 555 aa3.09□□□□□ -1.91
TCF4-250ENST00000625849 PAK1IP1Q9NWT1 392 aaPredicted RBP3.09□□□□□ -1.91
TCF4-250ENST00000625849 SLC24A2Q9UI40 661 aa3.09□□□□□ -1.91
TCF4-250ENST00000625849 TINAGQ9UJW2 476 aa3.09□□□□□ -1.91
TCF4-250ENST00000625849 ITGA11Q9UKX5 1188 aa3.09□□□□□ -1.91
TCF4-250ENST00000625849 PSME2Q9UL46 239 aa3.09□□□□□ -1.91
TCF4-250ENST00000625849 ENTPD4Q9Y227 616 aa3.09□□□□□ -1.91
TCF4-250ENST00000625849 GINS2Q9Y248 185 aa3.09□□□□□ -1.91
TCF4-250ENST00000625849 MRPS28Q9Y2Q9 187 aaKnown RBP3.09□□□□□ -1.91
TCF4-250ENST00000625849 CHTOPQ9Y3Y2 248 aaKnown RBP3.09□□□□□ -1.91
TCF4-250ENST00000625849 RIPK3Q9Y572 518 aa3.09□□□□□ -1.91
TCF4-250ENST00000625849 CLIC4Q9Y696 253 aa3.09□□□□□ -1.91
TCF4-250ENST00000625849 ASTN2O75129 1339 aaPredicted RBP3.09□□□□□ -1.91
TCF4-250ENST00000625849 CNTNAP1P78357 1384 aa3.09□□□□□ -1.92
TCF4-250ENST00000625849 DCCP43146 1447 aa3.09□□□□□ -1.92
TCF4-250ENST00000625849 CRB1P82279 1406 aa3.09□□□□□ -1.92
TCF4-250ENST00000625849 EDC4Q6P2E9 1401 aaKnown RBP3.09□□□□□ -1.92
TCF4-250ENST00000625849 UBR1Q8IWV7 1749 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 RGPD2P0DJD1 1756 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 LAMB2P55268 1798 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 DOCK1Q14185 1865 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 PNMA8CA0A1B0GUJ8 204 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 ZSCAN5CA6NGD5 496 aaPredicted RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 LRRC53A6NM62 1247 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 KRBOX1C9JBD0 128 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 LOC110117498-PIK3R3F6TDL0 507 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 H0Y626 953 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 PER2O15055 1255 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 CASC3O15234 703 aaKnown RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 IRAK2O43187 625 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 SLC7A4O43246 635 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 ZBTB43O43298 467 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 BUB1O43683 1085 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 CIDEAO60543 219 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 MRPS14O60783 128 aaKnown RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 BCAS1O75363 584 aaPredicted RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 CCNKO75909 580 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 MOCS3O95396 460 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 CTDNEP1O95476 244 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 NADKO95544 446 aaPredicted RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 PTBP3O95758 552 aaKnown RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 TTC4O95801 387 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 TSPAN12O95859 305 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 ADAP00813 363 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 IGHV4-39P01824 125 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 APOA1P02647 267 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 SLC4A1P02730 911 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 SERPINA6P08185 405 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 CSF1P09603 554 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 DBTP11182 482 aaKnown RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 ATP6V1B1P15313 513 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 HOXB8P17481 243 aaPredicted RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 CKMT2P17540 419 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 SRD5A1P18405 259 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 CD58P19256 250 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 POU1F1P28069 291 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 CHATP28329 748 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 TLX1P31314 330 aaPredicted RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 RORAP35398 523 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 ADD2P35612 726 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 HNF4AP41235 474 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 SERPINH1P50454 418 aaKnown RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 TPMTP51580 245 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 GBX2P52951 348 aaPredicted RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 SUCLG1P53597 346 aaKnown RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 HADHBP55084 474 aaKnown RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 ACTR2P61160 394 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 COPZ1P61923 177 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 YWHAGP61981 247 aaKnown RBP eCLIP3.08□□□□□ -1.92
TCF4-250ENST00000625849 CSNK2BP67870 215 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 OTUD4Q01804 1114 aaKnown RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 ROR1Q01973 937 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 EPS8Q12929 822 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 ITGADQ13349 1161 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 PPIL2Q13356 520 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 TNK1Q13470 666 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 CAPRIN1Q14444 709 aaKnown RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 TIGD6Q17RP2 521 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 SOWAHAQ2M3V2 549 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 GRAMD1BQ3KR37 738 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 CTXN3Q4LDR2 81 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 XKR3Q5GH77 459 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 SEL1L2Q5TEA6 688 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 KRT79Q5XKE5 535 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 PDPK2PQ6A1A2 396 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 C3orf33Q6P1S2 294 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 FUT10Q6P4F1 479 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 ZNF530Q6P9A1 599 aaPredicted RBP3.08□□□□□ -1.92
TCF4-250ENST00000625849 RFWD3Q6PCD5 774 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 IYDQ6PHW0 289 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 ZYG11AQ6WRX3 759 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 MFSD6Q6ZSS7 791 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 PLEKHM3Q6ZWE6 761 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 PRSS48Q7RTY5 328 aa3.08□□□□□ -1.92
TCF4-250ENST00000625849 PRSS42Q7Z5A4 293 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms