RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 PRPH2P23942 346 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 SERPINB3P29508 390 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 DEKP35659 375 aaKnown RBP11.51□□□□□ -0.57
LINC00963-217ENST00000624009 CA7P43166 264 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 MEOX1P50221 254 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 ERVK-8P63133 956 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 PSPHP78330 225 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 PMP22Q01453 160 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 SRSF11Q05519 484 aaKnown RBP11.51□□□□□ -0.57
LINC00963-217ENST00000624009 IFFO1Q0D2I5 559 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 MAP4K2Q12851 820 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 ZNF267Q14586 743 aaPredicted RBP11.51□□□□□ -0.57
LINC00963-217ENST00000624009 HEPACAMQ14CZ8 416 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 EBPQ15125 230 aaKnown RBP11.51□□□□□ -0.57
LINC00963-217ENST00000624009 CEBPEQ15744 281 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 HYAL4Q2M3T9 481 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 ZNF791Q3KP31 576 aaPredicted RBP11.51□□□□□ -0.57
LINC00963-217ENST00000624009 C6orf163Q5TEZ5 329 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 DGAT2L6Q6ZPD8 337 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 GK5Q6ZS86 529 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 MDGA2Q7Z553 956 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 TAGAPQ8N103 731 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 EID3Q8N140 333 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 CPSF7Q8N684 471 aaKnown RBP11.51□□□□□ -0.57
LINC00963-217ENST00000624009 CCNYL1Q8N7R7 359 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 ZNF441Q8N8Z8 693 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 ZNF675Q8TD23 568 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 PPWD1Q96BP3 646 aaKnown RBP11.51□□□□□ -0.57
LINC00963-217ENST00000624009 CTHRC1Q96CG8 243 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 SPACA9Q96E40 222 aaPredicted RBP11.51□□□□□ -0.57
LINC00963-217ENST00000624009 SECISBP2Q96T21 854 aaKnown RBP11.51□□□□□ -0.57
LINC00963-217ENST00000624009 FAM173AQ9BQD7 235 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 CNPPD1Q9BV87 410 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 WWTR1Q9GZV5 400 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 RAB21Q9UL25 225 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 ERVK-19Q9WJR5 959 aa11.51□□□□□ -0.57
LINC00963-217ENST00000624009 LRBAP50851 2863 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 C2orf92A0A1B0GVN3 265 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 ANKRD33BA6NCL7 494 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 SMIM23A6NLE4 172 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 CAPN14A8MX76 684 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 UBFD1O14562 309 aaKnown RBP11.5□□□□□ -0.57
LINC00963-217ENST00000624009 SLC19A2O60779 497 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 TRIM13O60858 407 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 BCAS2O75934 225 aaPredicted RBP11.5□□□□□ -0.57
LINC00963-217ENST00000624009 RSL1D1O76021 490 aaKnown RBP11.5□□□□□ -0.57
LINC00963-217ENST00000624009 SLITRK5O94991 958 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 NADKO95544 446 aaPredicted RBP11.5□□□□□ -0.57
LINC00963-217ENST00000624009 CLPSP04118 112 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 UROSP10746 265 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 AGAP20933 346 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 CNR1P21554 472 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 TIA1P31483 386 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC00963-217ENST00000624009 SERPINB5P36952 375 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 TMED10P49755 219 aaKnown RBP11.5□□□□□ -0.57
LINC00963-217ENST00000624009 KCNK10P57789 538 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 RNFT1Q5M7Z0 435 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 TCHHL1Q5QJ38 904 aaPredicted RBP11.5□□□□□ -0.57
LINC00963-217ENST00000624009 TBCELQ5QJ74 424 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 IL20RBQ6UXL0 311 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 RPTNQ6XPR3 784 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 IKBIPQ70UQ0 350 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 SPPL2CQ8IUH8 684 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 C4orf33Q8N1A6 199 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 ZNF615Q8N8J6 731 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 CCDC63Q8NA47 563 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 PAQR8Q8TEZ7 354 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 ZNF764Q96H86 408 aaPredicted RBP11.5□□□□□ -0.57
LINC00963-217ENST00000624009 MAGED4Q96JG8 741 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 ZDHHC11Q9H8X9 412 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 RRAGDQ9NQL2 400 aaPredicted RBP11.5□□□□□ -0.57
LINC00963-217ENST00000624009 SACM1LQ9NTJ5 587 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 TAS2R7Q9NYW3 318 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 CNIH4Q9P003 139 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 SUCOQ9UBS9 1254 aaKnown RBP11.5□□□□□ -0.57
LINC00963-217ENST00000624009 PLEKHB1Q9UF11 243 aaPredicted RBP11.5□□□□□ -0.57
LINC00963-217ENST00000624009 ZNF639Q9UID6 485 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 ZNF780BQ9Y6R6 833 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 APCP25054 2843 aa11.5□□□□□ -0.57
LINC00963-217ENST00000624009 TACC2O95359 2948 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 MYOCOSA0A1B0GUC4 107 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 GNG14A0A1W2PPG7 69 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 TLDC2A0PJX2 215 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 WASHC1A8K0Z3 465 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 NPIPA5E9PKD4 350 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 ACOT7O00154 380 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 HRKO00198 91 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 TFECO14948 347 aaPredicted RBP11.49□□□□□ -0.57
LINC00963-217ENST00000624009 PCDH7O60245 1069 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 GLSO94925 669 aaPredicted RBP11.49□□□□□ -0.57
LINC00963-217ENST00000624009 P04436 131 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 FGF4P08620 206 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 IFI6P09912 130 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 NEFHP12036 1026 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 NAGAP17050 411 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 S1PR1P21453 382 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 NRG3P56975 720 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 DCAF7P61962 342 aa11.49□□□□□ -0.57
LINC00963-217ENST00000624009 RAE1P78406 368 aaKnown RBP11.49□□□□□ -0.57
LINC00963-217ENST00000624009 ZNF763Q0D2J5 394 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms