RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 VEZF1Q14119 521 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 SERTAD2Q14140 314 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 VMACQ2NL98 169 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 ARHGAP40Q5TG30 622 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 GLYATQ6IB77 296 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 TMEM107Q6UX40 140 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 QSOX2Q6ZRP7 698 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 RNF130Q86XS8 419 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 SHISA5Q8N114 240 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 C10orf111Q8N326 155 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 RBM18Q96H35 190 aaKnown RBP13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 ZNF570Q96NI8 536 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 PELOQ9BRX2 385 aaKnown RBP13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 YIPF2Q9BWQ6 316 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 TGIF2Q9GZN2 237 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 TMEM38AQ9H6F2 299 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 DCLRE1BQ9H816 532 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 APMAPQ9HDC9 416 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 ACSL6Q9UKU0 697 aa13.34□□□□□ -0.27
CLTCL1-212ENST00000622493 A0A087WV62 115 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 GSTA4O15217 222 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 CPNE3O75131 537 aaKnown RBP13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 TNFRSF21O75509 655 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 GALNSP34059 522 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 ANXA11P50995 505 aaKnown RBP13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 RAB15P59190 212 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 DCDP81605 110 aaKnown RBP13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 RHDQ02161 417 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 TP53BP2Q13625 1128 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 ADRM1Q16186 407 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 ISXQ2M1V0 245 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 MTX3Q5HYI7 312 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 C1orf189Q5VU69 101 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 SLC26A7Q8TE54 656 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 LIN37Q96GY3 246 aaPredicted RBP13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 LRFN5Q96NI6 719 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 RBCK1Q9BYM8 510 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 LANCL2Q9NS86 450 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 RAPGEFL1Q9UHV5 662 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 FAF1Q9UNN5 650 aaPredicted RBP13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 USP22Q9UPT9 525 aa13.33□□□□□ -0.27
CLTCL1-212ENST00000622493 SEC16AO15027 2179 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 IGLV3-12A0A075B6K2 115 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 PLOD3O60568 738 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 CDC123O75794 336 aaPredicted RBP13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 PSMG1O95456 288 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 C1QCP02747 245 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 RORAP35398 523 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 MC3RP41968 323 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 PRIM2P49643 509 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 ID2Q02363 134 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 EIF3IQ13347 325 aaKnown RBP13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 ERV3-1Q14264 604 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 PRICKLE4Q2TBC4 344 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 NKAIN1Q4KMZ8 207 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 CCDC157Q569K6 752 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 ZNF628Q5EBL2 1059 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 ZNF385CQ66K41 422 aaPredicted RBP13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 ZFP1Q6P2D0 407 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 CEACAM20Q6UY09 585 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 SPATA24Q86W54 205 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 ZZZ3Q8IYH5 903 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 OR2L13Q8N349 312 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 SLC38A9Q8NBW4 561 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 C11orf65Q8NCR3 313 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 HIPK4Q8NE63 616 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 MIPOL1Q8TD10 442 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 CTHRC1Q96CG8 243 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 NSMCE2Q96MF7 247 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 ZPBPQ9BS86 351 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 ALOXE3Q9BYJ1 711 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 DDX18Q9NVP1 670 aaKnown RBP13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 SLC39A1Q9NY26 324 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 CLDN16Q9Y5I7 305 aa13.33□□□□□ -0.28
CLTCL1-212ENST00000622493 SPEGQ15772 3267 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 PCNX2A6NKB5 2137 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 TCRBV3S1A0A5B6 114 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 AGRPO00253 132 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 UPK1AO00322 258 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 CXCR6O00574 342 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 OR10H2O60403 315 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 MT-CO3P00414 261 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 C8BP07358 591 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 CCL4P13236 92 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 ETFAP13804 333 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 NT5EP21589 574 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 GCKP35557 465 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 STT3AP46977 705 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 POLE2P56282 527 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 DSTNP60981 165 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 AP2B1P63010 937 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 BTG2P78543 158 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 OCA2Q04671 838 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 MAP4K2Q12851 820 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 LTB4RQ15722 352 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 ZNF630Q2M218 657 aaPredicted RBP13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 COX20Q5RI15 118 aa13.32□□□□□ -0.28
CLTCL1-212ENST00000622493 GCNT6Q5T4J0 391 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms