RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 C2orf73Q8N5S3 287 aaPredicted RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 TMEM185AQ8NFB2 350 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 OR2T35Q8NGX2 323 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 GAL3ST1Q99999 423 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 MOB1AQ9H8S9 216 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 LIPT1Q9Y234 373 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 MROH1Q8NDA8 1641 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 FFAR2O15552 330 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 TOX4O94842 621 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 CDK14O94921 469 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ARHGAP1Q07960 439 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 FGFBP1Q14512 234 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 FRG2Q64ET8 278 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 SLC24A5Q71RS6 500 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 SGPP2Q8IWX5 399 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 SMPDL3AQ92484 453 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ELP4Q96EB1 424 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ZDHHC12Q96GR4 267 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 FRG2BQ96QU4 278 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 TBX5Q99593 518 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ACO2Q99798 780 aaKnown RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 SRA1Q9HD15 236 aaKnown RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 CENPMQ9NSP4 180 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 EPHA6Q9UF33 1036 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 FBXW2Q9UKT8 454 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 PCDHGA2Q9Y5H1 932 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 KIAA0513O60268 411 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 B4GALT4O60513 344 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 GP1BBP13224 206 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 SMPD1P17405 629 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ITGB8P26012 769 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ACTR1BP42025 376 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 MADCAM1Q13477 382 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 CLEC12AQ5QGZ9 265 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 SLC8B1Q6J4K2 584 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 TSPYL5Q86VY4 417 aaPredicted RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 PROKR1Q8TCW9 393 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 THAP4Q8WY91 577 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 GLYATL1Q969I3 302 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 TMEM125Q96AQ2 219 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 NELL2Q99435 816 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 POMT1Q9Y6A1 747 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 TXNL1O43396 289 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 GRM5P41594 1212 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 CRYZQ08257 329 aaKnown RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 SPHARQ15513 63 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 LRRC37A5PQ49AS3 106 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 CYBRD1Q53TN4 286 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 USP51Q70EK9 711 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 LACC1Q8IV20 430 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 OR8S1Q8NH09 359 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 C2orf15Q8WU43 125 aaKnown RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 LCN9Q8WX39 176 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF576Q9H609 170 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 GAREM1Q9H706 876 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 SMCO4Q9NRQ5 59 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 TEX10Q9NXF1 929 aaPredicted RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 RNF215Q9Y6U7 377 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 PPLO60437 1756 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 A8MU76 341 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 CDC7O00311 574 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ANGPTL7O43827 346 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 DLX3O60479 287 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 STK17BO94768 372 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 DIRAS1O95057 198 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 AK1P00568 194 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 SFTPCP11686 197 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 PKLRP30613 574 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 PTGIRP43119 386 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF136P52737 540 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 HIST2H3PS2Q5TEC6 136 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 TMPRSS7Q7RTY8 843 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 UBE2FQ969M7 185 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 PYCR2Q96C36 320 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 G6PC3Q9BUM1 346 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 KCNIP2Q9NS61 270 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 TDP1Q9NUW8 608 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ERVK-18Q9QC07 812 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 WDR45Q9Y484 360 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 BCL9LQ86UU0 1499 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 C2orf78A6NCI8 922 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 GPR89AB7ZAQ6 455 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 IMPA2O14732 288 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 ECI2O75521 394 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 KLK3P07288 261 aaPredicted RBP6.87□□□□□ -1.31
COLCA1-205ENST00000620864 GPR89BP0CG08 455 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 RAB3AP20336 220 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 PRPH2P23942 346 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 MNX1P50219 401 aaPredicted RBP6.87□□□□□ -1.31
COLCA1-205ENST00000620864 RPL7AP62424 266 aaKnown RBP6.87□□□□□ -1.31
COLCA1-205ENST00000620864 FLI1Q01543 452 aaPredicted RBP6.87□□□□□ -1.31
COLCA1-205ENST00000620864 PLP2Q04941 152 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 NFATC3Q12968 1075 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 EML3Q32P44 896 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 WSCD1Q658N2 575 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 CEACAM19Q7Z692 300 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 TP53INP2Q8IXH6 220 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 KIAA0319LQ8IZA0 1049 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 NANPQ8TBE9 248 aa6.87□□□□□ -1.31
COLCA1-205ENST00000620864 DGAT2Q96PD7 388 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms