RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CDC123O75794 336 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 SNAPINO95295 136 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 SLC34A2O95436 690 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 OR56A5P0C7T3 313 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 HLA-DMAP28067 261 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 KCNJ5P48544 419 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 IFITM2Q01629 132 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ARHGAP11BQ3KRB8 267 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 RIC1Q4ADV7 1423 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF697Q5TEC3 545 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 GPR149Q86SP6 731 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 CLECL1Q8IZS7 167 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 DNAJC22Q8N4W6 341 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 RAB42Q8N4Z0 105 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 C2CD4AQ8NCU7 369 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 OR4F6Q8NGB9 312 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 OR52B6Q8NGF0 335 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 KCNN1Q92952 543 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 OR51B5Q9H339 312 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 TMEM2Q9UHN6 1383 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 TMEM94Q12767 1356 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ACOT8O14734 319 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 SLC9A3R1O14745 358 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ARSBP15848 533 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 PCSK1P29120 753 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 EXOSC2Q13868 293 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 TANGO2Q6ICL3 276 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 METAP1DQ6UB28 335 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 SLC25A44Q96H78 314 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 GPER1Q99527 375 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 JAM3Q9BX67 310 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 WDR26Q9H7D7 661 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 SCP2D1Q9UJQ7 156 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 OR12D1P0DN82 309 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 HK3P52790 923 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 CDK6Q00534 326 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 HTR4Q13639 388 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 GPALPP1Q8IXQ4 340 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF383Q8NA42 475 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 OR4K3Q96R72 315 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 SARDHQ9UL12 918 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 A0A0G2JMP0 313 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 B4DXG7 233 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 MRPS14O60783 128 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 RXRBP28702 533 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 MAP3K8P41279 467 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 TEKQ02763 1124 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 OR4M2Q8NGB6 313 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 WDR83Q9BRX9 315 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 GBX2P52951 348 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 RGS8P57771 180 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 DNAJB13P59910 316 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 FOXR2Q6PJQ5 311 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 FAM124AQ86V42 546 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 CBLN2Q8IUK8 224 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 JAGN1Q8N5M9 183 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 LMO3Q8TAP4 145 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 NDC1Q9BTX1 674 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 PCDHGB2Q9Y5G2 931 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 OR2A25A4D2G3 310 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 KRBOX1C9JBD0 128 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 QSOX1O00391 747 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 EIF1AXP47813 144 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 SOX9P48436 509 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ID2Q02363 134 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 NCBP2-AS2Q69YL0 99 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 KDM8Q8N371 416 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 DUSP19Q8WTR2 217 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 SLC41A3Q96GZ6 507 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 CXorf58Q96LI9 332 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 KCNK12Q9HB15 430 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 AHSPQ9NZD4 102 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 PCDHB9Q9Y5E1 797 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 DNAJC15Q9Y5T4 150 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 A0A1B0GV90 55 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 OR1F1O43749 312 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 CLDN12P56749 244 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 RNF4P78317 190 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 OR52W1Q6IF63 320 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 FAAP20Q6NZ36 180 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 KDM1BQ8NB78 822 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 SUMF2Q8NBJ7 301 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ARL11Q969Q4 196 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 FOXN4Q96NZ1 517 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 TRIM62Q9BVG3 475 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 MRM3Q9HC36 420 aaKnown RBP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 MUTYHQ9UIF7 546 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 ACKR2O00590 384 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 AQP7O14520 342 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 FBXO24O75426 580 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 GJB3O75712 270 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 PYCR1P32322 319 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 NCBP2P52298 156 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 TNFAIP1Q13829 316 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 TRAM1Q15629 374 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 Q5PR19 223 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 UBXN11Q5T124 520 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 TSPYL5Q86VY4 417 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-214ENST00000620676 OR4F15Q8NGB8 312 aa4.81□□□□□ -1.64
VPS13D-214ENST00000620676 WFIKKN2Q8TEU8 576 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms