RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 BPIFB3P59826 476 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 CCINQ13939 588 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 RBMS3Q6XE24 437 aaKnown RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 NAXDQ8IW45 347 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 B3GNT7Q8NFL0 401 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 COQ8AQ8NI60 647 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 STAG3L4Q8TBR4 150 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 NETO1Q8TDF5 533 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 NUDT8Q8WV74 236 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 FCRL2Q96LA5 508 aaPredicted RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 YIPF4Q9BSR8 244 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 THUMPD3Q9BV44 507 aaKnown RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 TFB2MQ9H5Q4 396 aaKnown RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 THUMPD1Q9NXG2 353 aaKnown RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 ZNF226Q9NYT6 803 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 EXTL2Q9UBQ6 330 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 LSM2Q9Y333 95 aaKnown RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 CBY1Q9Y3M2 126 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 BACE2Q9Y5Z0 518 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 CFAP20Q9Y6A4 193 aaKnown RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 AP1M2Q9Y6Q5 423 aa9.87□□□□□ -0.83
VPS11-207ENST00000620429 NYNRINQ9P2P1 1898 aaKnown RBP9.87□□□□□ -0.83
VPS11-207ENST00000620429 HHLA1C9JL84 531 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 UBE2CO00762 179 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 VEGFDO43915 354 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 KERAO60938 352 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 SDC3O75056 442 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 DUSP11O75319 330 aaKnown RBP9.86□□□□□ -0.83
VPS11-207ENST00000620429 KDM4BO94953 1096 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 UROSP10746 265 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 PAICSP22234 425 aaKnown RBP9.86□□□□□ -0.83
VPS11-207ENST00000620429 FPR3P25089 353 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 CD52P31358 61 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 AGTR2P50052 363 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 KIAA1024LP59773 190 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 MC2RQ01718 297 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 MXD1Q05195 221 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 PON3Q15166 354 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 TSNQ15631 228 aaKnown RBP9.86□□□□□ -0.83
VPS11-207ENST00000620429 SPDYE7PQ495Y7 208 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 SPIN4Q56A73 249 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 C6orf136Q5SQH8 315 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 ZNF57Q68EA5 555 aaPredicted RBP9.86□□□□□ -0.83
VPS11-207ENST00000620429 HAGHLQ6PII5 290 aaPredicted RBP9.86□□□□□ -0.83
VPS11-207ENST00000620429 ZNF730Q6ZMV8 503 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 PDZD9Q8IXQ8 264 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 DMRTC2Q8IXT2 367 aaPredicted RBP9.86□□□□□ -0.83
VPS11-207ENST00000620429 PLA2G15Q8NCC3 412 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 KCNJ9Q92806 393 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 FATE1Q969F0 183 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 ESAMQ96AP7 390 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 IMP4Q96G21 291 aaKnown RBP9.86□□□□□ -0.83
VPS11-207ENST00000620429 KLHL5Q96PQ7 755 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 OSGEPL1Q9H4B0 414 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 C11orf49Q9H6J7 331 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 EXO1Q9UQ84 846 aaKnown RBP9.86□□□□□ -0.83
VPS11-207ENST00000620429 TRPV2Q9Y5S1 764 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 A0A1B0GV90 55 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 ANKDD1BA6NHY2 528 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 ANXA2P2A6NMY6 339 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 DPM1O60762 260 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 ECI2O75521 394 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 THP07101 528 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 ADRA2AP08913 450 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 DDX6P26196 483 aaKnown RBP eCLIP9.86□□□□□ -0.83
VPS11-207ENST00000620429 EVX1P49640 407 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 ECH1Q13011 328 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 TIGD5Q53EQ6 642 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 SIRPB2Q5JXA9 342 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 AVPI1Q5T686 147 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 MRNIPQ6NTE8 343 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 C3orf33Q6P1S2 294 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 PAQR3Q6TCH7 311 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 FGD2Q7Z6J4 655 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 CALHM3Q86XJ0 350 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 FAM217AQ8IXS0 508 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 SLC43A2Q8N370 569 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 L3MBTL4Q8NA19 623 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 TMIEQ8NEW7 156 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 GSDMCQ9BYG8 508 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 IKZF5Q9H5V7 419 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 ATP13A1Q9HD20 1204 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 STARD7Q9NQZ5 370 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 MED11Q9P086 117 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 KLHL42Q9P2K6 505 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 SAMD4AQ9UPU9 718 aaKnown RBP9.86□□□□□ -0.83
VPS11-207ENST00000620429 FAM50BQ9Y247 325 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 Q9Y3F1 56 aa9.86□□□□□ -0.83
VPS11-207ENST00000620429 M0QZ92 97 aa9.85□□□□□ -0.83
VPS11-207ENST00000620429 ADAMDEC1O15204 470 aa9.85□□□□□ -0.83
VPS11-207ENST00000620429 TPST2O60704 377 aa9.85□□□□□ -0.83
VPS11-207ENST00000620429 NIPSNAP2O75323 286 aa9.85□□□□□ -0.83
VPS11-207ENST00000620429 AP2A2O94973 939 aa9.85□□□□□ -0.83
VPS11-207ENST00000620429 OAZ2O95190 189 aa9.85□□□□□ -0.83
VPS11-207ENST00000620429 ZDHHC11BP0C7U3 371 aa9.85□□□□□ -0.83
VPS11-207ENST00000620429 PIPP12273 146 aaPredicted RBP9.85□□□□□ -0.83
VPS11-207ENST00000620429 CYBAP13498 195 aa9.85□□□□□ -0.83
VPS11-207ENST00000620429 POU3F2P20265 443 aaPredicted RBP9.85□□□□□ -0.83
VPS11-207ENST00000620429 THPOP40225 353 aa9.85□□□□□ -0.83
VPS11-207ENST00000620429 PTGFRP43088 359 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms