RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 INTS11Q5TA45 600 aaKnown RBP4.93□□□□□ -1.62
SHMT1-211ENST00000618902 DEPDC1Q5TB30 811 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 AGAP7PQ5VUJ5 663 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 IL23RQ5VWK5 629 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 FRG2Q64ET8 278 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 B3GNTL1Q67FW5 361 aaPredicted RBP4.93□□□□□ -1.62
SHMT1-211ENST00000618902 CLEC6AQ6EIG7 209 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 HIST2H2AA3Q6FI13 130 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 PPP4R4Q6NUP7 873 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 RPUSD3Q6P087 351 aaKnown RBP4.93□□□□□ -1.62
SHMT1-211ENST00000618902 IGFL2Q6UWQ7 119 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 LINC00299Q6ZSB3 139 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 ABHD13Q7L211 337 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 MAVSQ7Z434 540 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 PPP1R32Q7Z5V6 425 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 MILR1Q7Z6M3 343 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 SPATA24Q86W54 205 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 SNX32Q86XE0 403 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 PRSS58Q8IYP2 241 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 FAM9CQ8IZT9 166 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 MMP21Q8N119 569 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 LGI4Q8N135 537 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 CA13Q8N1Q1 262 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 ANKFN1Q8N957 763 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 EXD3Q8N9H8 876 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 TNIP2Q8NFZ5 429 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 OR51Q1Q8NH59 317 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 STT3BQ8TCJ2 826 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 PYDC1Q8WXC3 89 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 ATP6V1E2Q96A05 226 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 GAL3ST3Q96A11 431 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 PNPLA2Q96AD5 504 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 MMABQ96EY8 250 aaPredicted RBP4.93□□□□□ -1.62
SHMT1-211ENST00000618902 ABHD17AQ96GS6 310 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF597Q96LX8 424 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 AGAP4Q96P64 663 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 BBC3Q96PG8 261 aaPredicted RBP4.93□□□□□ -1.62
SHMT1-211ENST00000618902 FRG2BQ96QU4 278 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 CSF3RQ99062 836 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 MAPKAP1Q9BPZ7 522 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 TUBA1CQ9BQE3 449 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 OSBPL10Q9BXB5 764 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 RBCK1Q9BYM8 510 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 NUF2Q9BZD4 464 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 RNF32Q9H0A6 362 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 TUBB1Q9H4B7 451 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 SOX17Q9H6I2 414 aaPredicted RBP4.93□□□□□ -1.62
SHMT1-211ENST00000618902 ANKHQ9HCJ1 492 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 MID1IP1Q9NPA3 183 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 PRDM9Q9NQV7 894 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 NPDC1Q9NQX5 325 aaPredicted RBP4.93□□□□□ -1.62
SHMT1-211ENST00000618902 GPR83Q9NYM4 423 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 KCMF1Q9P0J7 381 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 TRPS1Q9UHF7 1281 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 ZDHHC2Q9UIJ5 367 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 PPT2Q9UMR5 302 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 PTRH2Q9Y3E5 179 aaKnown RBP4.93□□□□□ -1.62
SHMT1-211ENST00000618902 NAALAD2Q9Y3Q0 740 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 TRAF6Q9Y4K3 522 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 CCL27Q9Y4X3 112 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 GMEB1Q9Y692 573 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 ESPL1Q14674 2120 aa4.93□□□□□ -1.62
SHMT1-211ENST00000618902 ITPR2Q14571 2701 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 NUP214P35658 2090 aaPredicted RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 CELSR2Q9HCU4 2923 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 A0A087WXM4 84 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 MYOCOSA0A1B0GUC4 107 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 A0A1W2PS29 197 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 CDC14CA4D256 554 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ANKDD1BA6NHY2 528 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 E9PBE3 544 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 FOXE1O00358 373 aaPredicted RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 CYR61O00622 381 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 SOCS6O14544 535 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ALOX12BO75342 701 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 PRKRAO75569 313 aaKnown RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 C1QL1O75973 258 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 H6PDO95479 791 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 HPP00738 406 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 GBAP04062 536 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 GPIP06744 558 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ZGLP1P0C6A0 271 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 FAM87AP0C7U9 286 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 PRKAR1AP10644 381 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 IDO1P14902 403 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 TPP2P29144 1249 aaPredicted RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 PEX19P40855 299 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 XCR1P46094 333 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 RPS6KA3P51812 740 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 PKNOX1P55347 436 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 PSME3P61289 254 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 RAE1P78406 368 aaKnown RBP4.92□□□□□ -1.62
SHMT1-211ENST00000618902 BTN3A2P78410 334 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 BTG2P78543 158 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 HMGCS1Q01581 520 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 RHAGQ02094 409 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 KCNC4Q03721 635 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF33BQ06732 778 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 CHAF1BQ13112 559 aa4.92□□□□□ -1.62
SHMT1-211ENST00000618902 EXT1Q16394 746 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms