RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 MT-CO3P00414 261 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 ZNF28P17035 718 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 PTPN6P29350 595 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 TTKP33981 857 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 MSX2P35548 267 aaPredicted RBP15.3■□□□□ 0.04
SNAP47-213ENST00000617596 ETV5P41161 510 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 RAB38P57729 211 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 HSPB3Q12988 150 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 SELPLGQ14242 412 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 ZNF829Q3KNS6 432 aaPredicted RBP15.3■□□□□ 0.04
SNAP47-213ENST00000617596 IRAK1BP1Q5VVH5 260 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 CDCP2Q5VXM1 449 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 ZNF621Q6ZSS3 439 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 HPS6Q86YV9 775 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 PGAM4Q8N0Y7 254 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 OR4A15Q8NGL6 344 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 COL26A1Q96A83 441 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 ROPN1LQ96C74 230 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 CLIP3Q96DZ5 547 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 CMKLR1Q99788 373 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 OSBPL11Q9BXB4 747 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 NPLQ9BXD5 320 aaPredicted RBP15.3■□□□□ 0.04
SNAP47-213ENST00000617596 TMEM121BQ9BXQ6 578 aaPredicted RBP15.3■□□□□ 0.04
SNAP47-213ENST00000617596 INIPQ9NRY2 104 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 MAPRE3Q9UPY8 281 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 LOXL2Q9Y4K0 774 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 PCDHGA1Q9Y5H4 931 aa15.3■□□□□ 0.04
SNAP47-213ENST00000617596 A0A1B0GX78 115 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 RNASET2O00584 256 aaKnown RBP15.29■□□□□ 0.04
SNAP47-213ENST00000617596 DSCR3O14972 297 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 FGF17O60258 216 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 FTH1P19P0C7X4 201 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 ATP6V1B1P15313 513 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 SLC6A2P23975 617 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 TLX1P31314 330 aaPredicted RBP15.29■□□□□ 0.04
SNAP47-213ENST00000617596 XCR1P46094 333 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 SLC7A2P52569 658 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 MTPNP58546 118 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 KCNC4Q03721 635 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 ANXA8L1Q5VT79 327 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 NANOGP8Q6NSW7 305 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 C8orf82Q6P1X6 216 aaPredicted RBP15.29■□□□□ 0.04
SNAP47-213ENST00000617596 GLRX5Q86SX6 157 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 CCDC116Q8IYX3 515 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 ZNF420Q8TAQ5 688 aaPredicted RBP15.29■□□□□ 0.04
SNAP47-213ENST00000617596 DOK4Q8TEW6 326 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 C17orf50Q8WW18 174 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 CCDC115Q96NT0 180 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 CGREF1Q99674 301 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 GPATCH1Q9BRR8 931 aaKnown RBP15.29■□□□□ 0.04
SNAP47-213ENST00000617596 IKZF5Q9H5V7 419 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 NANOGQ9H9S0 305 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 GID8Q9NWU2 228 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 MS4A12Q9NXJ0 267 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 ADA2Q9NZK5 511 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 EHD3Q9NZN3 535 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 TRPC4Q9UBN4 977 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 MAN2B2Q9Y2E5 1009 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 SPACA6W5XKT8 324 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 NUP214P35658 2090 aaPredicted RBP15.29■□□□□ 0.04
SNAP47-213ENST00000617596 SEC16AO15027 2179 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 A0A1W2PNU3 283 aaPredicted RBP15.29■□□□□ 0.04
SNAP47-213ENST00000617596 H0YIG0 161 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 SOX11P35716 441 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 MAPK10P53779 464 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 ARSFP54793 590 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 MANFP55145 182 aaKnown RBP15.29■□□□□ 0.04
SNAP47-213ENST00000617596 PCBP4P57723 403 aaKnown RBP15.29■□□□□ 0.04
SNAP47-213ENST00000617596 SKP1P63208 163 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 BTG2P78543 158 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 GAB1Q13480 694 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 RHBDD2Q6NTF9 364 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 RAB11FIP2Q7L804 512 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 TMEM151BQ8IW70 566 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 PRSS58Q8IYP2 241 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 FAM156AQ8NDB6 213 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 VPS37AQ8NEZ2 397 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 OR5AK3PQ8NH89 298 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 SNRNP27Q8WVK2 155 aaKnown RBP15.29■□□□□ 0.04
SNAP47-213ENST00000617596 ZNF597Q96LX8 424 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 CNBD2Q96M20 576 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 GLIPR2Q9H4G4 154 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 PIF1Q9H611 641 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 AKIRIN1Q9H9L7 192 aaPredicted RBP15.29■□□□□ 0.04
SNAP47-213ENST00000617596 ZNF304Q9HCX3 659 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 PNPLA3Q9NST1 481 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 TAS2R7Q9NYW3 318 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.29■□□□□ 0.04
SNAP47-213ENST00000617596 ACSL6Q9UKU0 697 aa15.29■□□□□ 0.04
SNAP47-213ENST00000617596 FAM149AA5PLN7 773 aa15.28■□□□□ 0.04
SNAP47-213ENST00000617596 HTR3EA5X5Y0 456 aa15.28■□□□□ 0.04
SNAP47-213ENST00000617596 H3BNH8 94 aa15.28■□□□□ 0.04
SNAP47-213ENST00000617596 FGF5P12034 268 aa15.28■□□□□ 0.04
SNAP47-213ENST00000617596 RNH1P13489 461 aaKnown RBP15.28■□□□□ 0.04
SNAP47-213ENST00000617596 TCN1P20061 433 aaPredicted RBP15.28■□□□□ 0.04
SNAP47-213ENST00000617596 NCBP2P52298 156 aaKnown RBP eCLIP15.28■□□□□ 0.04
SNAP47-213ENST00000617596 CASP9P55211 416 aa15.28■□□□□ 0.04
SNAP47-213ENST00000617596 MC2RQ01718 297 aa15.28■□□□□ 0.04
SNAP47-213ENST00000617596 KCTD21Q4G0X4 260 aa15.28■□□□□ 0.04
SNAP47-213ENST00000617596 VWA2Q5GFL6 755 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms