RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 DNAJC22Q8N4W6 341 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR6Q1Q8NGQ2 317 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ADAMTS19Q8TE59 1207 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 C11orf24Q96F05 449 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 SECISBP2Q96T21 854 aaKnown RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC17A9Q9BYT1 436 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 CXorf36Q9H7Y0 433 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 FEZF1A0PJY2 475 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 JRKO75564 520 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 FURINP09958 794 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 MASP1P48740 699 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 MRPL19P49406 292 aaKnown RBP5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 SOWAHCQ53LP3 525 aaPredicted RBP5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 MFSD4BQ5TF39 518 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 MEDAGQ5VYS4 303 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 PLAG1Q6DJT9 500 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 TECPR1Q7Z6L1 1165 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 NRSN1Q8IZ57 195 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 CHPT1Q8WUD6 406 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 BADQ92934 168 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 LMLNQ96KR4 655 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 KCNS3Q9BQ31 491 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 EPHX3Q9H6B9 360 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZSCAN32Q9NX65 697 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 ANKMY1Q9P2S6 941 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 UTRNP46939 3433 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 FOXE1O00358 373 aaPredicted RBP5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 CDRT1O95170 752 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 CAPNS1P04632 268 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 ALPPP05187 535 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 PTNP21246 168 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 CHMP24386 653 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 GJA4P35212 333 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 SRP54P61011 504 aaKnown RBP5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 MRPL28Q13084 256 aaKnown RBP5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLAMF1Q13291 335 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 QPRTQ15274 297 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 MICAQ29983 383 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 ARL9Q6T311 187 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 KRT74Q7RTS7 529 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 PDZD3Q86UT5 571 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 CADM2Q8N3J6 435 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 ACOT4Q8N9L9 421 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR51G2Q8NGK0 314 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 DOK4Q8TEW6 326 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 COQ8BQ96D53 544 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR2M4Q96R27 311 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZDHHC5Q9C0B5 715 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 RLIMQ9NVW2 624 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 C14orf119Q9NWQ9 140 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 VNN3Q9NY84 501 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 MARK1Q9P0L2 795 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 ADAM30Q9UKF2 790 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 SHROOM3Q8TF72 1996 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 SETD2Q9BYW2 2564 aaPredicted RBP5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 C1orf226A1L170 272 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 DYRK3O43781 588 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 IDH3BO43837 385 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 BMP1P13497 986 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 IL12RB1P42701 662 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 BIKQ13323 160 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 TCEAL5Q5H9L2 206 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 GTF2IRD2BQ6EKJ0 949 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM71E1Q6IPT2 247 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 NIPAL1Q6NVV3 410 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 FBXO46Q6PJ61 603 aaPredicted RBP5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 TAF8Q7Z7C8 310 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 B3GNT8Q7Z7M8 397 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 GTF2IRD2Q86UP8 949 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM129CQ86XR2 697 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 PROKR2Q8NFJ6 384 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 CHTF18Q8WVB6 975 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 CIDECQ96AQ7 238 aaPredicted RBP5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 NIPSNAP1Q9BPW8 284 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 BTBD1Q9H0C5 482 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 CPNE5Q9HCH3 593 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 ANKHQ9HCJ1 492 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 POLE4Q9NR33 117 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 USP9YO00507 2555 aaPredicted RBP5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 NUDT14O95848 222 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 PTHP01270 115 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 SUZ12Q15022 739 aaKnown RBP5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 TMEM44Q2T9K0 475 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 COX20Q5RI15 118 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 CALHM3Q86XJ0 350 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 B3GNT7Q8NFL0 401 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR10H4Q8NGA5 316 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR2L2Q8NH16 312 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 RIPOR3Q96MK2 946 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 IFT27Q9BW83 186 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 ACSS1Q9NUB1 689 aaPredicted RBP5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 STMN3Q9NZ72 180 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 TNFRSF10DQ9UBN6 386 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 PADI2Q9Y2J8 665 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 COL6A6A6NMZ7 2263 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 ESPL1Q14674 2120 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 IRGMA1A4Y4 181 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 SH3D21A4FU49 640 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 KRBA1A5PL33 1030 aa5.35□□□□□ -1.55
SYNCRIP-204ENST00000616122 MRPS14O60783 128 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms