RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ALPPP05187 535 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 BNC1Q01954 994 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 ACSM5Q6NUN0 579 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 ANGPTL6Q8NI99 470 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 NEIL3Q8TAT5 605 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 GTF3C2Q8WUA4 911 aaPredicted RBP12.5□□□□□ -0.41
MSH6-214ENST00000616033 EGLN3Q9H6Z9 239 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 SLC28A3Q9HAS3 691 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 KCNK12Q9HB15 430 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 LHX3Q9UBR4 397 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 ING4Q9UNL4 249 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 ZFR2Q9UPR6 939 aaKnown RBP12.5□□□□□ -0.41
MSH6-214ENST00000616033 WDR90Q96KV7 1748 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.5□□□□□ -0.41
MSH6-214ENST00000616033 JUPP14923 745 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 NNMTP40261 264 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 PFN3P60673 137 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 SMAD3P84022 425 aaKnown RBP12.5□□□□□ -0.41
MSH6-214ENST00000616033 MTAPQ13126 283 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 CRB2Q5IJ48 1285 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 TRIM40Q6P9F5 258 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 IQCHQ86VS3 1027 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 ZNF740Q8NDX6 193 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 TRPV1Q8NER1 839 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 RDH8Q9NYR8 311 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 FTSJ1Q9UET6 329 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 GBF1Q92538 1859 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 H3BNC9 293 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 SLC16A8O95907 504 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 RNF144AP50876 292 aaPredicted RBP12.5□□□□□ -0.41
MSH6-214ENST00000616033 B4GALNT1Q00973 533 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 COX10Q12887 443 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 PUM1Q14671 1186 aaKnown RBP eCLIP12.5□□□□□ -0.416e-7■■■□□ 16.1
MSH6-214ENST00000616033 NANOGP1Q8N7R0 232 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 ZNF680Q8NEM1 530 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 OR8J2Q8NGG1 315 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 OR52I1Q8NGK6 324 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 HMGB4Q8WW32 186 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 ASZ1Q8WWH4 475 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 TBC1D20Q96BZ9 403 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 C11orf24Q96F05 449 aaPredicted RBP12.5□□□□□ -0.41
MSH6-214ENST00000616033 PTGFRNQ9P2B2 879 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 ZNF282Q9UDV7 671 aaPredicted RBP12.5□□□□□ -0.41
MSH6-214ENST00000616033 EXO1Q9UQ84 846 aaKnown RBP12.5□□□□□ -0.41
MSH6-214ENST00000616033 ZSWIM8A7E2V4 1837 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 A0A0A6YYJ9 748 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 A0A1W2PRB8 838 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 A0A1W2PRG6 482 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 SLC38A8A6NNN8 435 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 SSNA1O43805 119 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 STC2O76061 302 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 SLC22A5O76082 557 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 CXCL3P19876 107 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 AGFG1P52594 562 aaKnown RBP12.49□□□□□ -0.41
MSH6-214ENST00000616033 ZNF767PQ75MW2 155 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 TAS1R1Q7RTX1 841 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 LRRC70Q7Z2Q7 622 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 IFNL1Q8IU54 200 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 OR7G3Q8NG95 312 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 SPRTNQ9H040 489 aaPredicted RBP12.49□□□□□ -0.41
MSH6-214ENST00000616033 ABCG4Q9H172 646 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 CNOT2Q9NZN8 540 aaKnown RBP12.49□□□□□ -0.41
MSH6-214ENST00000616033 KCNE1BA0A087WTH5 132 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 TRIM77I1YAP6 450 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 OSMP13725 252 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 XCR1P46094 333 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 C19orf57Q0VDD7 668 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 HECTD3Q5T447 861 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 FAM27D1Q5T7N8 215 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 AGTRAPQ6RW13 159 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 ADGRD2Q7Z7M1 963 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 ZNF366Q8N895 744 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 OR8K3Q8NH51 312 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 SLC22A8Q8TCC7 542 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 RNFT2Q96EX2 444 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 C12orf66Q96MD2 445 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 CLEC4MQ9H2X3 399 aaPredicted RBP12.49□□□□□ -0.41
MSH6-214ENST00000616033 C12orf10Q9HB07 376 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 NDUFB11Q9NX14 153 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 ASIC5Q9NY37 505 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 SEC14L3Q9UDX4 400 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 ANGPT4Q9Y264 503 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 ARID1AO14497 2285 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 ALPK2Q86TB3 2170 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 C1orf226A1L170 272 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 SH3D21A4FU49 640 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 BUD31P41223 144 aaPredicted RBP12.49□□□□□ -0.41
MSH6-214ENST00000616033 GPR85P60893 370 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 PRKCZQ05513 592 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 CRYZQ08257 329 aaKnown RBP12.49□□□□□ -0.41
MSH6-214ENST00000616033 RTP2Q5QGT7 225 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 MORN1Q5T089 497 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 ANXA8L1Q5VT79 327 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 NRTNQ99748 197 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 WRAP53Q9BUR4 548 aaKnown RBP12.49□□□□□ -0.41
MSH6-214ENST00000616033 CLEC4EQ9ULY5 219 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 KCNE2Q9Y6J6 123 aa12.49□□□□□ -0.41
MSH6-214ENST00000616033 TRAV20A0A0B4J274 112 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 RAB19A4D1S5 217 aa12.48□□□□□ -0.41
MSH6-214ENST00000616033 H7C0S8 307 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms