RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 LRIT1Q9P2V4 623 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 SEC14L3Q9UDX4 400 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NDOR1Q9UHB4 597 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 MAPRE3Q9UPY8 281 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 AP3M1Q9Y2T2 418 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 PCDHGA8Q9Y5G5 932 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 ARID1BQ8NFD5 2236 aaPredicted RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 PCDH15Q96QU1 1955 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CACNA1EQ15878 2313 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 TMEM265A0A087WTH1 108 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 IGHV5-51A0A0C4DH38 117 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 ENO4A6NNW6 628 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 RHPN2P1A8MT19 583 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 H3BSA7 217 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 BCAT2O15382 392 aaPredicted RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 FGF17O60258 216 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 IGLV3-19P01714 112 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 PROS1P07225 676 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 ARAFP10398 606 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 DRD2P14416 443 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 FMO3P31513 532 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 PCGF2P35227 344 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 TXNL4AP83876 142 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 PPP2R2BQ00005 443 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 TGM3Q08188 693 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 PIN1Q13526 163 aaPredicted RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 RAPSNQ13702 412 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 PUM1Q14671 1186 aaKnown RBP eCLIP3.23□□□□□ -1.89
LIG4-205ENST00000614526 TEAD4Q15561 434 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 SMN1Q16637 294 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 EXOC3L2Q2M3D2 409 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 LIN52Q52LA3 116 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 IFI44LQ53G44 452 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 MFSD4BQ5TF39 518 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 TMEM236Q5W0B7 351 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 SAXO2Q658L1 398 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 MRM1Q6IN84 353 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 RBM44Q6ZP01 1051 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 ZBTB46Q86UZ6 589 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 COMTD1Q86VU5 262 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 MCATQ8IVS2 390 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 SPEM1Q8N4L4 309 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 ZNF614Q8N883 585 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 CAMKVQ8NCB2 501 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 SRFBP1Q8NEF9 429 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 OR7G2Q8NG99 324 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 OR4D11Q8NGI4 311 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 MAFAQ8NHW3 353 aaPredicted RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 KLHL6Q8WZ60 621 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 GAL3ST3Q96A11 431 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 NEURL3Q96EH8 262 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 AHCYL2Q96HN2 611 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 MBOAT4Q96T53 435 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 FEVQ99581 238 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 RHNO1Q9BSD3 238 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 LIN28AQ9H9Z2 209 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 PNPLA3Q9NST1 481 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 GIMAP4Q9NUV9 329 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 GIN1Q9NXP7 522 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 KCMF1Q9P0J7 381 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 PDP2Q9P2J9 529 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 TMEFF2Q9UIK5 374 aaPredicted RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 PILRAQ9UKJ1 303 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 DAPP1Q9UN19 280 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 CORO2BQ9UQ03 480 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 ANGPT4Q9Y264 503 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 TSC22D4Q9Y3Q8 395 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 FAM32AQ9Y421 112 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 BDP1A6H8Y1 2624 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 PI4KAP42356 2102 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 LOC100130705A0A1B0GUX0 176 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 CPED1A4D0V7 1026 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 TMEM247A6NEH6 219 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 OR5K4A6NMS3 321 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 A8MUA0 341 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 H3BNH8 94 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 ZBTB11O95625 1053 aaPredicted RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 FESP07332 822 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 CHRM4P08173 479 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 IGFBP1P08833 259 aaPredicted RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 TFPTP0C1Z6 253 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 NME1P15531 152 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 NR4A1P22736 598 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 SERPINB1P30740 379 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 DNAJA1P31689 397 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 IDH2P48735 452 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 BTG2P78543 158 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 ADARB1P78563 741 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 CHRNEQ04844 493 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 EEF1A2Q05639 463 aaKnown RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 FADDQ13158 208 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 SLC13A2Q13183 592 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 GPR68Q15743 365 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 MAPK11Q15759 364 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 ZNF630Q2M218 657 aaPredicted RBP3.23□□□□□ -1.89
LIG4-205ENST00000614526 MLIPQ5VWP3 458 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 FIGNL1Q6PIW4 674 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 DGAT2L6Q6ZPD8 337 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 GKN2Q86XP6 184 aa3.23□□□□□ -1.89
LIG4-205ENST00000614526 VRK2Q86Y07 508 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms