RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 IKZF3Q9UKT9 509 aa6.38□□□□□ -1.39
CDKAL1-204ENST00000613575 CA14Q9ULX7 337 aa6.38□□□□□ -1.39
CDKAL1-204ENST00000613575 HSPB11Q9Y547 144 aa6.38□□□□□ -1.39
CDKAL1-204ENST00000613575 RAI2Q9Y5P3 530 aa6.38□□□□□ -1.39
CDKAL1-204ENST00000613575 ALG5Q9Y673 324 aa6.38□□□□□ -1.39
CDKAL1-204ENST00000613575 U3KQ87 197 aa6.38□□□□□ -1.39
CDKAL1-204ENST00000613575 V9GYQ6 96 aa6.38□□□□□ -1.39
CDKAL1-204ENST00000613575 PLXNA3P51805 1871 aa6.38□□□□□ -1.39
CDKAL1-204ENST00000613575 NYNRINQ9P2P1 1898 aaKnown RBP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 A0A1W2PP18 115 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 GNG14A0A1W2PPG7 69 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 CIB4A0PJX0 185 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 FXYD1O00168 92 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 ARNTLO00327 626 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 PIP5K1BO14986 540 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 SCAMP1O15126 338 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 TOX3O15405 576 aaPredicted RBP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 ECI2O75521 394 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 SRP72O76094 671 aaKnown RBP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 IFNGP01579 166 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 RHOCP08134 193 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 ACSM4P0C7M7 580 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 UROSP10746 265 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 NELFEP18615 380 aaKnown RBP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 HDCP19113 662 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 RPS3P23396 243 aaKnown RBP eCLIP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 SLC6A2P23975 617 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 ZFP36L2P47974 494 aaKnown RBP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 CSNK1DP48730 415 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 IL2P60568 153 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 SKP1P63208 163 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 ARF5P84085 180 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 EPS8Q12929 822 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 INPP5AQ14642 412 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 PCBP2Q15366 365 aaKnown RBP eCLIP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 NRF1Q16656 503 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 TCTN1Q2MV58 587 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 RFX4Q33E94 735 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 NHSL2Q5HYW2 709 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 RIPPLY2Q5TAB7 128 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 GPR139Q6DWJ6 353 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 RPL13AP3Q6NVV1 102 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 OGFOD3Q6PK18 319 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 PIWIL3Q7Z3Z3 882 aaKnown RBP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 TRMT11Q7Z4G4 463 aaKnown RBP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 GLT6D1Q7Z4J2 308 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 CAMKMTQ7Z624 323 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 NECAB2Q7Z6G3 386 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 PTRH1Q86Y79 214 aaKnown RBP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 DENND1CQ8IV53 801 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 ZZZ3Q8IYH5 903 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 PIANPQ8IYJ0 282 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 GPR65Q8IYL9 337 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 NRSN1Q8IZ57 195 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 STK40Q8N2I9 435 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 C12orf45Q8N5I9 185 aaPredicted RBP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 EIF4E3Q8N5X7 224 aaKnown RBP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 RNF148Q8N7C7 305 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 GDPD1Q8N9F7 314 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 CAMKVQ8NCB2 501 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 PAPD5Q8NDF8 572 aaKnown RBP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 CHDHQ8NE62 594 aaPredicted RBP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 OR6X1Q8NH79 312 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 ROBO4Q8WZ75 1007 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 LRRC58Q96CX6 371 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 SLC45A3Q96JT2 553 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 NECAB3Q96P71 396 aaPredicted RBP6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 LMF1Q96S06 567 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 KCNJ15Q99712 375 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 ACTR6Q9GZN1 396 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 PCDHAC1Q9H158 963 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 MUC13Q9H3R2 512 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 ANKRD19PQ9H560 264 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 ASCL3Q9NQ33 180 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 PTTG3PQ9NZH4 202 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 USP22Q9UPT9 525 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 PCDHGB2Q9Y5G2 931 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 PCDHGA1Q9Y5H4 931 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 PCDHA9Q9Y5H5 950 aa6.37□□□□□ -1.39
CDKAL1-204ENST00000613575 LOC100506127A0A0U1RQW1 187 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 A0A1B0GTL3 188 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 ATP6AP2A0A1C7CYW4 349 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 LRRC14BA6NHZ5 514 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 CCDC154A6NI56 674 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 AGAP5A6NIR3 686 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 A8MV72 311 aaPredicted RBP6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 H7C1Q1 480 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 DNASE2O00115 360 aaPredicted RBP6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 GSTA4O15217 222 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 VPS26AO75436 327 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 MED6O75586 246 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 ATP6AP2O75787 350 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 GABARAPO95166 117 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 GOSR1O95249 250 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 PAK4O96013 591 aaPredicted RBP6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 RLN2P04090 185 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 CYBBP04839 570 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 CNPP09543 421 aaKnown RBP6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 PIRTP0C851 137 aa6.36□□□□□ -1.39
CDKAL1-204ENST00000613575 CBSLP0DN79 551 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms