RNA–Protein interactions for RNA: ENST00000612761.1

CFDP1-211, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 395 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-211ENST00000612761 SLC25A42Q86VD7 318 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 HPS6Q86YV9 775 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 PHC2Q8IXK0 858 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.36□□□□□ -1.87
CFDP1-211ENST00000612761 OR52B6Q8NGF0 335 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 SEPT1Q8WYJ6 367 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 AP2M1Q96CW1 435 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 CDKN2AIPNLQ96HQ2 116 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 ZNF597Q96LX8 424 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 NDNQ99608 321 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 ATF6BQ99941 703 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 ZNF577Q9BSK1 485 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 PI4K2AQ9BTU6 479 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 CACNG6Q9BXT2 260 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 AKIRIN1Q9H9L7 192 aaPredicted RBP3.36□□□□□ -1.87
CFDP1-211ENST00000612761 MID1IP1Q9NPA3 183 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 GPR83Q9NYM4 423 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 AKAP7Q9P0M2 348 aaPredicted RBP3.36□□□□□ -1.87
CFDP1-211ENST00000612761 FAM208BQ5VWN6 2430 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 USP9XQ93008 2570 aaPredicted RBP3.36□□□□□ -1.87
CFDP1-211ENST00000612761 USP24Q9UPU5 2620 aa3.36□□□□□ -1.87
CFDP1-211ENST00000612761 DMDP11532 3685 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 LAMB2P55268 1798 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 MAP1BP46821 2468 aaKnown RBP3.35□□□□□ -1.87
CFDP1-211ENST00000612761 ITGB4P16144 1822 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 DMXL1Q9Y485 3027 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 SYCE3A1L190 88 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 MTMR11A4FU01 709 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 C17orf105B2RV13 164 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 PRSS46E5RG02 174 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 TTI1O43156 1089 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 TLX2O43763 284 aaPredicted RBP3.35□□□□□ -1.87
CFDP1-211ENST00000612761 KINO60870 393 aaKnown RBP3.35□□□□□ -1.87
CFDP1-211ENST00000612761 ATP9AO75110 1047 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 MT-ND3P03897 115 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 SBK2P0C263 348 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 SP9P0CG40 484 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 F3P13726 295 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 CPA3P15088 417 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 TIA1P31483 386 aaKnown RBP eCLIP3.35□□□□□ -1.87
CFDP1-211ENST00000612761 ETV5P41161 510 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 FRKP42685 505 aaPredicted RBP3.35□□□□□ -1.87
CFDP1-211ENST00000612761 CLCN4P51793 760 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 ERVK-16P61578 105 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 CETN1Q12798 172 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 DUSP5Q16690 384 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 FUT11Q495W5 492 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 FAM106AQ4KMX7 169 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 SLC39A12Q504Y0 691 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 CCDC92Q53HC0 331 aaPredicted RBP3.35□□□□□ -1.87
CFDP1-211ENST00000612761 FAM182AQ5T1J6 154 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 LRRC38Q5VT99 294 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 FAM166AQ6J272 317 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 ALKBH5Q6P6C2 394 aaKnown RBP3.35□□□□□ -1.87
CFDP1-211ENST00000612761 PODNL1Q6PEZ8 512 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 BTNL8Q6UX41 500 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 CPEB2Q7Z5Q1 589 aaKnown RBP3.35□□□□□ -1.87
CFDP1-211ENST00000612761 MEX3DQ86XN8 651 aaKnown RBP3.35□□□□□ -1.87
CFDP1-211ENST00000612761 RNF130Q86XS8 419 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 MARCH9Q86YJ5 346 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 NAT8LQ8N9F0 302 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 LPCAT1Q8NF37 534 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 OPTNQ96CV9 577 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 ZNF350Q9GZX5 532 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 DEFB129Q9H1M3 183 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 THAP9Q9H5L6 903 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 POLKQ9UBT6 870 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 SLC12A6Q9UHW9 1150 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 NCKAP1Q9Y2A7 1128 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 ASPMQ8IZT6 3477 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 ANKRD26Q9UPS8 1709 aa3.35□□□□□ -1.87
CFDP1-211ENST00000612761 ALPK3Q96L96 1907 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 HCFC1P51610 2035 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 ZNF318Q5VUA4 2279 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 IGLV3-10A0A075B6K4 115 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 TRAV18A0A075B6X5 111 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 A0A087WZ39 114 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 ILVBLA1L0T0 632 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 SHISA9B4DS77 424 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 E5RGE8 158 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 F8VVB4 439 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 F8VWA3 439 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 RTN2O75298 545 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 NME6O75414 186 aaPredicted RBP3.34□□□□□ -1.87
CFDP1-211ENST00000612761 SAP30O75446 220 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 SLC16A8O95907 504 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 YES1P07947 543 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 FOLR2P14207 255 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 PTMSP20962 102 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 NDST2P52849 883 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 KIAA1024LP59773 190 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 ARF5P84085 180 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 FKBP3Q00688 224 aaKnown RBP3.34□□□□□ -1.87
CFDP1-211ENST00000612761 NPRL3Q12980 569 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 ZNF146Q15072 292 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 RPS6KA1Q15418 735 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 ERO1BQ86YB8 467 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 PEX5LQ8IYB4 626 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 SLC22A15Q8IZD6 547 aa3.34□□□□□ -1.87
CFDP1-211ENST00000612761 NEK11Q8NG66 645 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms