RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ICA1LQ8NDH6 482 aa8.39□□□□□ -1.07
CCDC47-207ENST00000612558 EDARADDQ8WWZ3 215 aa8.39□□□□□ -1.07
CCDC47-207ENST00000612558 TANKQ92844 425 aa8.39□□□□□ -1.07
CCDC47-207ENST00000612558 MAL2Q969L2 176 aa8.39□□□□□ -1.07
CCDC47-207ENST00000612558 CCDC74AQ96AQ1 378 aa8.39□□□□□ -1.07
CCDC47-207ENST00000612558 MOAP1Q96BY2 351 aa8.39□□□□□ -1.07
CCDC47-207ENST00000612558 CSF3RQ99062 836 aa8.39□□□□□ -1.07
CCDC47-207ENST00000612558 BDH2Q9BUT1 245 aa8.39□□□□□ -1.07
CCDC47-207ENST00000612558 C3orf14Q9HBI5 128 aa8.39□□□□□ -1.07
CCDC47-207ENST00000612558 FSCN3Q9NQT6 498 aa8.39□□□□□ -1.07
CCDC47-207ENST00000612558 THUMPD1Q9NXG2 353 aaKnown RBP8.39□□□□□ -1.07
CCDC47-207ENST00000612558 SLC6A14Q9UN76 642 aa8.39□□□□□ -1.07
CCDC47-207ENST00000612558 SCN2AQ99250 2005 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 MN1Q10571 1320 aaPredicted RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 HYKKA2RU49 373 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 FAM149AA5PLN7 773 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 H0YJX3 145 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 CLOCKO15516 846 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 SIGLEC6O43699 453 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 DEAF1O75398 565 aaPredicted RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 NSA2O95478 260 aaKnown RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 ZNF682O95780 498 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 IFNA14P01570 189 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 FHP07954 510 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 SYPP08247 313 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 ARAFP10398 606 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 ZNF26P17031 533 aaPredicted RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 AVPR2P30518 371 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 ANXA11P50995 505 aaKnown RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 RAB38P57729 211 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 SIM1P81133 766 aaPredicted RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 TXNL4AP83876 142 aaKnown RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 PRR5P85299 388 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 EEF1A2Q05639 463 aaKnown RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 DUSP2Q05923 314 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 SQSTM1Q13501 440 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 TP53BP2Q13625 1128 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 ELOAQ14241 798 aaKnown RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 NKG7Q16617 165 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 INAVAQ3KP66 663 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 TRIM61Q5EBN2 209 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 CBLL1Q75N03 491 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 EIF3MQ7L2H7 374 aaKnown RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 PRSS42Q7Z5A4 293 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 SPRED1Q7Z699 444 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 KMT5CQ86Y97 462 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 ZC3H7AQ8IWR0 971 aaKnown RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 HORMAD2Q8N7B1 307 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 TTC29Q8NA56 475 aaPredicted RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 OR5T3Q8NGG3 340 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 OR56A1Q8NGH5 318 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 OR9A4Q8NGU2 314 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 NFKBIDQ8NI38 313 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 ELP4Q96EB1 424 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 SLC41A2Q96JW4 573 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 ASPSCR1Q9BZE9 553 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 FAM117AQ9C073 453 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 COQ10BQ9H8M1 238 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 CLK4Q9HAZ1 481 aaKnown RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 A4GALTQ9NPC4 353 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 ZCCHC3Q9NUD5 404 aaKnown RBP8.38□□□□□ -1.07
CCDC47-207ENST00000612558 IRAK4Q9NWZ3 460 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 ADPRHL2Q9NX46 363 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 CLCA2Q9UQC9 943 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 ANGPT4Q9Y264 503 aa8.38□□□□□ -1.07
CCDC47-207ENST00000612558 LAMA1P25391 3075 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 A0A0A6YYC8 382 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-207ENST00000612558 LY6G6EA0A0G2JKS1 128 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 A0A1W2PS29 197 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 CPED1A4D0V7 1026 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 BLACEA4D250 179 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 EME2A4GXA9 379 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-207ENST00000612558 PATE3B3GLJ2 98 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 I3L1I5 382 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-207ENST00000612558 TOX3O15405 576 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-207ENST00000612558 EMC8O43402 210 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 SUV39H1O43463 412 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 CHST10O43529 356 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 FOXS1O43638 330 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 RDH16O75452 317 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 GCM2O75603 506 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-207ENST00000612558 PRSS23O95084 383 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 GPR75O95800 540 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 MT-ND1P03886 318 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 MSL3P1P0C860 447 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 CPMP14384 443 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 PORP16435 677 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-207ENST00000612558 CKMT2P17540 419 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 MATN1P21941 496 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 CSF2RBP32927 897 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 AVPR1BP47901 424 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 SEPHS1P49903 392 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 AQP4P55087 323 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 SELENOWP63302 87 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 SHC2P98077 582 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 FOLH1Q04609 750 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 GRM7Q14831 915 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 MYBPC3Q14896 1274 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 ANGPT1Q15389 498 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms