RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 STT3AP46977 705 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 AP1S2P56377 157 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 RPP38P78345 283 aaKnown RBP9.3□□□□□ -0.92
SSX3-204ENST00000612497 BASP1P80723 227 aaKnown RBP9.3□□□□□ -0.92
SSX3-204ENST00000612497 FAPQ12884 760 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 SETDB1Q15047 1291 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 EXOC3L2Q2M3D2 409 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 SBSNQ6UWP8 590 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 ANGPTL8Q6UXH0 198 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 RNF111Q6ZNA4 994 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 DGAT2L6Q6ZPD8 337 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 IL17RELQ6ZVW7 336 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 CHMP1BQ7LBR1 199 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 THOC6Q86W42 341 aaKnown RBP9.3□□□□□ -0.92
SSX3-204ENST00000612497 WFDC8Q8IUA0 241 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 ZNF610Q8N9Z0 462 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 C7orf57Q8NEG2 295 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 TTLQ8NG68 377 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 RDH11Q8TC12 318 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 FBXL8Q96CD0 374 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 LINGO1Q96FE5 620 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 TMEM41AQ96HV5 264 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 ZNF845Q96IR2 970 aaPredicted RBP9.3□□□□□ -0.92
SSX3-204ENST00000612497 TNFRSF13CQ96RJ3 184 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 TMEM204Q9BSN7 226 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 TSGA10Q9BZW7 698 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 ADAM19Q9H013 955 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 ESRP2Q9H6T0 727 aaKnown RBP9.3□□□□□ -0.92
SSX3-204ENST00000612497 RYDENQ9NUL5 291 aaKnown RBP9.3□□□□□ -0.92
SSX3-204ENST00000612497 WWOXQ9NZC7 414 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 SLC22A14Q9Y267 594 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 KCNE2Q9Y6J6 123 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 SPACA6W5XKT8 324 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 IGHV4-30-2A0A087WSY4 118 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 FAM234BA2RU67 622 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 ANKDD1BA6NHY2 528 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 GOLGA6L19H0YKK7 550 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 SSX4O60224 188 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 FGF17O60258 216 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 LMX1BO60663 402 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 MFAP3LO75121 409 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 PPP3CBP16298 524 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 DPP4P27487 766 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 HPDP32754 393 aaPredicted RBP9.29□□□□□ -0.92
SSX3-204ENST00000612497 GMPRP36959 345 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 SLC1A2P43004 574 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 KIR2DL2P43627 348 aaPredicted RBP9.29□□□□□ -0.92
SSX3-204ENST00000612497 SLC6A12P48065 614 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 HERVK_113P63132 956 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 ERVK-8P63133 956 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 VLDLRP98155 873 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 PCDH1Q08174 1060 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 TGM3Q08188 693 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 FUT7Q11130 342 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 SNX1Q13596 522 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 DHX34Q14147 1143 aaKnown RBP9.29□□□□□ -0.92
SSX3-204ENST00000612497 ZNF267Q14586 743 aaPredicted RBP9.29□□□□□ -0.92
SSX3-204ENST00000612497 EBPQ15125 230 aaKnown RBP9.29□□□□□ -0.92
SSX3-204ENST00000612497 OASLQ15646 514 aaKnown RBP9.29□□□□□ -0.92
SSX3-204ENST00000612497 CYB5R2Q6BCY4 276 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 ABHD17CQ6PCB6 329 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 PAQR3Q6TCH7 311 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 TMIGD1Q6UXZ0 262 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.29□□□□□ -0.92
SSX3-204ENST00000612497 IFNEQ86WN2 208 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 SMAP2Q8WU79 429 aaPredicted RBP9.29□□□□□ -0.92
SSX3-204ENST00000612497 FBXW5Q969U6 566 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 CTHRC1Q96CG8 243 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 NDNQ99608 321 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 MAPKAP1Q9BPZ7 522 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 ERVK-6Q9BXR3 956 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 METTL7AQ9H8H3 244 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 BARX1Q9HBU1 254 aaPredicted RBP9.29□□□□□ -0.92
SSX3-204ENST00000612497 LYRM4Q9HD34 91 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 SERHLQ9NQF3 203 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 HEY2Q9UBP5 337 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 GDF2Q9UK05 429 aaPredicted RBP9.29□□□□□ -0.92
SSX3-204ENST00000612497 RNF112Q9ULX5 631 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 ERVK-19Q9WJR5 959 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 DLGAP4Q9Y2H0 992 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 BOLA1Q9Y3E2 137 aa9.29□□□□□ -0.92
SSX3-204ENST00000612497 MAGED1Q9Y5V3 778 aaPredicted RBP9.29□□□□□ -0.92
SSX3-204ENST00000612497 C2orf92A0A1B0GVN3 265 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 C2orf72A6NCS6 295 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 SLC22A20A6NK97 555 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 CLOCKO15516 846 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 EMC8O43402 210 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 HCRTR2O43614 444 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 CDH16O75309 829 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 CLEC3AO75596 197 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 HAUS5O94927 633 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 CGAP01215 116 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 ZNF16P17020 682 aaPredicted RBP9.28□□□□□ -0.92
SSX3-204ENST00000612497 EGR1P18146 543 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 CPN2P22792 545 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 TMED10P49755 219 aaKnown RBP9.28□□□□□ -0.92
SSX3-204ENST00000612497 LHX2P50458 406 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 PLIN5Q00G26 463 aa9.28□□□□□ -0.92
SSX3-204ENST00000612497 SLBPQ14493 270 aaKnown RBP eCLIP9.28□□□□□ -0.92
SSX3-204ENST00000612497 SPA17Q15506 151 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms