RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 RPS6KA2Q15349 733 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 CPSF6Q16630 551 aaKnown RBP eCLIP12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 KBTBD12Q3ZCT8 623 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 C6orf163Q5TEZ5 329 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 C3orf62Q6ZUJ4 267 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 ISCA2Q86U28 154 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 UBTD2Q8WUN7 234 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 RNASE6Q93091 150 aaKnown RBP12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 UCN3Q969E3 161 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 NXNL1Q96CM4 212 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 HSPBAP1Q96EW2 488 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 UBXN10Q96LJ8 280 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 TRIB1Q96RU8 372 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 ATOH8Q96SQ7 321 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 SH3GL2Q99962 352 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 GSX1Q9H4S2 264 aaPredicted RBP12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 LYARQ9NX58 379 aaKnown RBP12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 TEX10Q9NXF1 929 aaPredicted RBP12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 CPSF2Q9P2I0 782 aaKnown RBP12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 CBLCQ9ULV8 474 aa12.25□□□□□ -0.45
HMGB1P24-201ENST00000611897 A0A1W2PR48 441 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 PROM1O43490 865 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 GPR75O95800 540 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 IL2RAP01589 272 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 FAM58BPP0C7Q3 252 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 DRD2P14416 443 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 KRT15P19012 456 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 NEK2P51955 445 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 GPX6P59796 221 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 IRF9Q00978 393 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 CRYZQ08257 329 aaKnown RBP12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 C2orf54Q08AI8 447 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 UAP1Q16222 522 aaPredicted RBP12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 NTRK2Q16620 822 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 PFKFB4Q16877 469 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 SPRED3Q2MJR0 410 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 GRTP1Q5TC63 336 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 NUDT13Q86X67 352 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 LACC1Q8IV20 430 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 GALNT12Q8IXK2 581 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 DND1Q8IYX4 353 aaKnown RBP12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 MMP21Q8N119 569 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 ZCCHC7Q8N3Z6 543 aaKnown RBP12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 C7orf57Q8NEG2 295 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 FAM222BQ8WU58 562 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 GNRHR2Q96P88 292 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 CXXC4Q9H2H0 198 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 EPB41L4BQ9H329 900 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 ACKR4Q9NPB9 350 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 SNX15Q9NRS6 342 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 IGSF5Q9NSI5 407 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 QPCTLQ9NXS2 382 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 ADGRE2Q9UHX3 823 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 EDARQ9UNE0 448 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 PCDHGA11Q9Y5H2 935 aa12.24□□□□□ -0.45
HMGB1P24-201ENST00000611897 A0A0A6YYD5 115 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 TUBAL3A6NHL2 446 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 OR6C76A6NM76 312 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 SYCE1LA8MT33 242 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 CAPN14A8MX76 684 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 AHRRA9YTQ3 701 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 EIF3HO15372 352 aaKnown RBP eCLIP12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 TRIM3O75382 744 aaPredicted RBP12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 C1QAP02745 245 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 NT5EP21589 574 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 PIK3R1P27986 724 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 PEX19P40855 299 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 PIK3CBP42338 1070 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 TMED10P49755 219 aaKnown RBP12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 ZNF136P52737 540 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 NRG3P56975 720 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 KEAP1Q14145 624 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 E2F2Q14209 437 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 KRTAP21-3Q3LHN1 58 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 EIPR1Q53HC9 387 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 WIPI1Q5MNZ9 446 aaPredicted RBP12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 TBCELQ5QJ74 424 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 DCST1Q5T197 706 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 OR52E8Q6IFG1 317 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 MAATS1Q7Z4T9 603 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 PACS2Q86VP3 889 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 LINC01560Q8TB33 94 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 FBF1Q8TES7 1133 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 REPS1Q96D71 796 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 TIMP4Q99727 224 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 ZNF717Q9BY31 904 aaPredicted RBP12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 METTL7AQ9H8H3 244 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 ASB4Q9Y574 426 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 NPFFR2Q9Y5X5 522 aa12.23□□□□□ -0.45
HMGB1P24-201ENST00000611897 SYT5O00445 386 aa12.22□□□□□ -0.45
HMGB1P24-201ENST00000611897 RAD51CO43502 376 aa12.22□□□□□ -0.45
HMGB1P24-201ENST00000611897 SIX3O95343 332 aaPredicted RBP12.22□□□□□ -0.45
HMGB1P24-201ENST00000611897 EPPINO95925 133 aa12.22□□□□□ -0.45
HMGB1P24-201ENST00000611897 CLPSP04118 112 aa12.22□□□□□ -0.45
HMGB1P24-201ENST00000611897 CT62P0C5K7 136 aa12.22□□□□□ -0.45
HMGB1P24-201ENST00000611897 PTX3P26022 381 aaPredicted RBP12.22□□□□□ -0.45
HMGB1P24-201ENST00000611897 CRABP2P29373 138 aa12.22□□□□□ -0.45
HMGB1P24-201ENST00000611897 STX2P32856 288 aa12.22□□□□□ -0.45
HMGB1P24-201ENST00000611897 BSGP35613 385 aa12.22□□□□□ -0.45
HMGB1P24-201ENST00000611897 CDK9P50750 372 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms