RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 PPP6CO00743 305 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 CCNT2O60583 730 aaKnown RBP20.22■□□□□ 0.83
CBWD3-207ENST00000611426 ITGA10O75578 1167 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 OTCP00480 354 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 JUNP05412 331 aaKnown RBP20.22■□□□□ 0.83
CBWD3-207ENST00000611426 ENO1P06733 434 aaKnown RBP20.22■□□□□ 0.83
CBWD3-207ENST00000611426 UROSP10746 265 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 CERS1P27544 350 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 ADSLP30566 484 aaPredicted RBP20.22■□□□□ 0.83
CBWD3-207ENST00000611426 LIM2P55344 173 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 HSF1Q00613 529 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 PCDH1Q08174 1060 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 ZNF630Q2M218 657 aaPredicted RBP20.22■□□□□ 0.83
CBWD3-207ENST00000611426 PAGE2BQ5JRK9 111 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 POGLUT1Q8NBL1 392 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 AGR3Q8TD06 166 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 F2RL3Q96RI0 385 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 ZNF385DQ9H6B1 395 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 SEMA4BQ9NPR2 832 aaPredicted RBP20.22■□□□□ 0.83
CBWD3-207ENST00000611426 DAPP1Q9UN19 280 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 MEMO1Q9Y316 297 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 CLDN16Q9Y5I7 305 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 DNAJC15Q9Y5T4 150 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 OR7A17O14581 309 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 ZNHIT1O43257 154 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 ZFAND5O76080 213 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 IFNA16P05015 189 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 MEOX1P50221 254 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 GPR143P51810 404 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 IRX1P78414 480 aaPredicted RBP20.21■□□□□ 0.83
CBWD3-207ENST00000611426 IRF8Q02556 426 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 TRAF3Q13114 568 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 CHIT1Q13231 466 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 SULF2Q8IWU5 870 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 CYP4Z2PQ8N1L4 340 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 CEP70Q8NHQ1 597 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 OR52B2Q96RD2 323 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 CSF3RQ99062 836 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 CCDC106Q9BWC9 280 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 ADAP2Q9NPF8 381 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 PRDM7Q9NQW5 492 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 ZNF223Q9UK11 482 aaPredicted RBP20.21■□□□□ 0.83
CBWD3-207ENST00000611426 A0A1B0GTL3 188 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 SYNDIG1LA6NDD5 238 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 CYR61O00622 381 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 CTNSO60931 367 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 T-ENOLP0DO92 83 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 TSPAN8P19075 237 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 CD22P20273 847 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 AGAP20933 346 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 CORO7P57737 925 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 ELAVL1Q15717 326 aaKnown RBP20.21■□□□□ 0.83
CBWD3-207ENST00000611426 PDCD2Q16342 344 aaPredicted RBP20.21■□□□□ 0.83
CBWD3-207ENST00000611426 LSM12Q3MHD2 195 aaKnown RBP20.21■□□□□ 0.83
CBWD3-207ENST00000611426 CHSY3Q70JA7 882 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 TMEM132CQ8N3T6 1108 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 KCNC2Q96PR1 638 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 PFDN4Q9NQP4 134 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 YARS2Q9Y2Z4 477 aaKnown RBP20.21■□□□□ 0.83
CBWD3-207ENST00000611426 CLCA3PQ9Y6N3 262 aa20.21■□□□□ 0.83
CBWD3-207ENST00000611426 PRRG2O14669 202 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 TFECO14948 347 aaPredicted RBP20.2■□□□□ 0.82
CBWD3-207ENST00000611426 PEX1O43933 1283 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 EPB42P16452 691 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 EPORP19235 508 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 EPHA3P29320 983 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 SSR4P51571 173 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 NCALDP61601 193 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 STX4Q12846 297 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 GGTA1PQ4G0N0 100 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 CLEC6AQ6EIG7 209 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 DOLPP1Q86YN1 238 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 TEX9Q8N6V9 391 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 SRFBP1Q8NEF9 429 aaKnown RBP20.2■□□□□ 0.82
CBWD3-207ENST00000611426 TWIST2Q8WVJ9 160 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 UBE2E3Q969T4 207 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 ALOXE3Q9BYJ1 711 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 ROGDIQ9GZN7 287 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 WDR55Q9H6Y2 383 aaPredicted RBP20.2■□□□□ 0.82
CBWD3-207ENST00000611426 NOL11Q9H8H0 719 aaKnown RBP20.2■□□□□ 0.82
CBWD3-207ENST00000611426 IPPKQ9H8X2 491 aa20.2■□□□□ 0.82
CBWD3-207ENST00000611426 NCOA6Q14686 2063 aaPredicted RBP20.19■□□□□ 0.82
CBWD3-207ENST00000611426 MYOCOSA0A1B0GUC4 107 aa20.19■□□□□ 0.82
CBWD3-207ENST00000611426 PRKNO60260 465 aaPredicted RBP20.19■□□□□ 0.82
CBWD3-207ENST00000611426 DNAJC8O75937 253 aaPredicted RBP20.19■□□□□ 0.82
CBWD3-207ENST00000611426 PTGER1P34995 402 aa20.19■□□□□ 0.82
CBWD3-207ENST00000611426 RFC3P40938 356 aa20.19■□□□□ 0.82
CBWD3-207ENST00000611426 CASP2P42575 452 aa20.19■□□□□ 0.82
CBWD3-207ENST00000611426 FOXA1P55317 472 aa20.19■□□□□ 0.82
CBWD3-207ENST00000611426 XKR7Q5GH72 579 aa20.19■□□□□ 0.82
CBWD3-207ENST00000611426 C16orf47Q6ZP98 133 aaPredicted RBP20.19■□□□□ 0.82
CBWD3-207ENST00000611426 LARP4Q71RC2 724 aaKnown RBP eCLIP20.19■□□□□ 0.82
CBWD3-207ENST00000611426 MDGA2Q7Z553 956 aa20.19■□□□□ 0.82
CBWD3-207ENST00000611426 CHERPQ8IWX8 916 aaKnown RBP20.19■□□□□ 0.82
CBWD3-207ENST00000611426 OR52B6Q8NGF0 335 aa20.19■□□□□ 0.82
CBWD3-207ENST00000611426 DAZLQ92904 295 aaKnown RBP20.19■□□□□ 0.82
CBWD3-207ENST00000611426 PHF12Q96QT6 1004 aa20.19■□□□□ 0.82
CBWD3-207ENST00000611426 TBCDQ9BTW9 1192 aa20.19■□□□□ 0.82
CBWD3-207ENST00000611426 LIN28AQ9H9Z2 209 aaKnown RBP20.19■□□□□ 0.82
CBWD3-207ENST00000611426 LYRM4Q9HD34 91 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms