RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 PAHP00439 452 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 APOC3P02656 99 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 GPX2P18283 190 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 HTR3AP46098 478 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 GCGRP47871 477 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 OR4N4Q8N0Y3 316 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 PGBD3Q8N328 593 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 C1QTNF3Q9BXJ4 246 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 OR51J1Q9H342 316 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 SLC45A1Q9Y2W3 748 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 PCDHGA2Q9Y5H1 932 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 PRSS21Q9Y6M0 314 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 ZNF840PA6NDX5 716 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 AGR2O95994 175 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 BMP8BP34820 402 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 SLC11A1P49279 550 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 ACVR1Q04771 509 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 IER5LQ5T953 404 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 BMP8AQ7Z5Y6 402 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 GALNT11Q8NCW6 608 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 TFGQ92734 400 aaPredicted RBP13.95□□□□□ -0.18
VPS36-207ENST00000611132 FYTTD1Q96QD9 318 aaKnown RBP13.95□□□□□ -0.18
VPS36-207ENST00000611132 LGR4Q9BXB1 951 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 IKZF5Q9H5V7 419 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 HMX1Q9NP08 348 aaPredicted RBP13.95□□□□□ -0.18
VPS36-207ENST00000611132 SLC25A37Q9NYZ2 338 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 KLHL21Q9UJP4 597 aa13.95□□□□□ -0.18
VPS36-207ENST00000611132 CARNS1A5YM72 827 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 CMPK1P30085 196 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 ADAM8P78325 824 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 POU4F3Q15319 338 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 RPS26P11Q5JNZ5 115 aaPredicted RBP13.94□□□□□ -0.18
VPS36-207ENST00000611132 HMGN2P46Q86SG4 172 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 CLDN22Q8N7P3 220 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 ECHDC3Q96DC8 303 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 SLIRPQ9GZT3 109 aaKnown RBP13.94□□□□□ -0.18
VPS36-207ENST00000611132 MTG2Q9H4K7 406 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 PHPT1Q9NRX4 125 aaPredicted RBP13.94□□□□□ -0.18
VPS36-207ENST00000611132 A0A1B0GTL3 188 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 WASHC1A8K0Z3 465 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 HLA-EP13747 358 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 IDSP22304 550 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 GUCA1AP43080 201 aaPredicted RBP13.94□□□□□ -0.18
VPS36-207ENST00000611132 PITPNBP48739 271 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 MASP1P48740 699 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 LRIF1Q5T3J3 769 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 SLC22A10Q63ZE4 541 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 ZNF551Q7Z340 670 aaPredicted RBP13.94□□□□□ -0.18
VPS36-207ENST00000611132 SERINC5Q86VE9 423 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 TMC8Q8IU68 726 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 CBARPQ8N350 705 aaPredicted RBP13.94□□□□□ -0.18
VPS36-207ENST00000611132 LINC01465Q8N7H1 131 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 OR8J2Q8NGG1 315 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 TM9SF2Q99805 663 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 ARL6Q9H0F7 186 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 GABARAPL1Q9H0R8 117 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 PADI2Q9Y2J8 665 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 OR2AT4A6NND4 320 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 J3KTA2 159 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 SLC16A8O95907 504 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 DRD5P21918 477 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 PYCR1P32322 319 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 RAB40BQ12829 278 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 ESCO2Q56NI9 601 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 THAP7Q9BT49 309 aaPredicted RBP13.94□□□□□ -0.18
VPS36-207ENST00000611132 GPR62Q9BZJ7 368 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 CACNG2Q9Y698 323 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 MRPL3P09001 348 aaKnown RBP13.94□□□□□ -0.18
VPS36-207ENST00000611132 RRAS2P62070 204 aaPredicted RBP13.94□□□□□ -0.18
VPS36-207ENST00000611132 EFR3AQ14156 821 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 FAM205BPQ63HN1 556 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 BAIAP2L2Q6UXY1 529 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 SLC16A12Q6ZSM3 486 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 TMCO2Q7Z6W1 182 aaPredicted RBP13.94□□□□□ -0.18
VPS36-207ENST00000611132 MRPL10Q7Z7H8 261 aaKnown RBP13.94□□□□□ -0.18
VPS36-207ENST00000611132 PAQR7Q86WK9 346 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 RNF175Q8N4F7 328 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 CIDECQ96AQ7 238 aaPredicted RBP13.94□□□□□ -0.18
VPS36-207ENST00000611132 ZSWIM3Q96MP5 696 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 MNTQ99583 582 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 ARHGAP39Q9C0H5 1083 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 PLCXD1Q9NUJ7 323 aa13.94□□□□□ -0.18
VPS36-207ENST00000611132 STOX2Q9P2F5 926 aaPredicted RBP13.94□□□□□ -0.18
VPS36-207ENST00000611132 GTPBP1O00178 669 aaKnown RBP13.93□□□□□ -0.18
VPS36-207ENST00000611132 ZNF806P0C7X5 589 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 PTNP21246 168 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 APEX1P27695 318 aaKnown RBP13.93□□□□□ -0.18
VPS36-207ENST00000611132 ZNF155Q12901 538 aaPredicted RBP13.93□□□□□ -0.18
VPS36-207ENST00000611132 AAK1Q2M2I8 961 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 LEXMQ3ZCV2 418 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 HLA-DQA1Q5Y7H0 255 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 METAP1DQ6UB28 335 aaPredicted RBP13.93□□□□□ -0.18
VPS36-207ENST00000611132 MFSD4AQ8N468 514 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 FCAMRQ8WWV6 532 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 KCNK12Q9HB15 430 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 MED31Q9Y3C7 131 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 HOXD9P28356 352 aaPredicted RBP13.93□□□□□ -0.18
VPS36-207ENST00000611132 ACVR1BP36896 505 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 RPS19P39019 145 aaKnown RBP13.93□□□□□ -0.18
VPS36-207ENST00000611132 PON3Q15166 354 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms