RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 TGM4P49221 684 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 KCNK10P57789 538 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 PLIN5Q00G26 463 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 SCN1BQ07699 218 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 SPATS1Q496A3 300 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 SLC35F1Q5T1Q4 408 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 FAM83HQ6ZRV2 1179 aaPredicted RBP15.16■□□□□ 0.02
RTN1-209ENST00000611068 TRILQ7L0X0 811 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 HDDC2Q7Z4H3 204 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 P3H2Q8IVL5 708 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 NRSN1Q8IZ57 195 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 SVOPLQ8N434 492 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 OR6M1Q8NGM8 313 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 GFM1Q96RP9 751 aaKnown RBP15.16■□□□□ 0.02
RTN1-209ENST00000611068 SORBS1Q9BX66 1292 aaKnown RBP15.16■□□□□ 0.02
RTN1-209ENST00000611068 SLC12A9Q9BXP2 914 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 HDAC8Q9BY41 377 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 SDR39U1Q9NRG7 319 aaPredicted RBP15.16■□□□□ 0.02
RTN1-209ENST00000611068 SLC23A2Q9UGH3 650 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 PLAGL1Q9UM63 463 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 TNPO3Q9Y5L0 923 aaKnown RBP15.16■□□□□ 0.02
RTN1-209ENST00000611068 ANHXE9PGG2 379 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 RFPL3O75679 317 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 EPB42P16452 691 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 PRLHRP49683 370 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 CXCR4P61073 352 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 TMEM52BQ4KMG9 183 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 ZNF782Q6ZMW2 699 aaPredicted RBP15.16■□□□□ 0.02
RTN1-209ENST00000611068 Q7L0L9 218 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 CCDC71Q8IV32 467 aaPredicted RBP15.16■□□□□ 0.02
RTN1-209ENST00000611068 SETD9Q8NE22 299 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 RPLP0P6Q8NHW5 317 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 DNASE1L2Q92874 299 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 ZNF382Q96SR6 550 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 ACTR8Q9H981 624 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 GALNT9Q9HCQ5 603 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 MAGEL2Q9UJ55 1249 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 PCOLCE2Q9UKZ9 415 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 TMCC3Q9ULS5 477 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 GMPPBQ9Y5P6 360 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 A0A1W2PQF6 199 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 PLA2G10O15496 165 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 WBP4O75554 376 aaKnown RBP15.15■□□□□ 0.02
RTN1-209ENST00000611068 HMGN1P05114 100 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 CBSLP0DN79 551 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 ITGAMP11215 1152 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 EPORP19235 508 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 CPN2P22792 545 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 IGFBP5P24593 272 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 CBSP35520 551 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 ZFP36L2P47974 494 aaKnown RBP15.15■□□□□ 0.02
RTN1-209ENST00000611068 S100A12P80511 92 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 PRKG2Q13237 762 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 MAD2L1BPQ15013 274 aaPredicted RBP15.15■□□□□ 0.02
RTN1-209ENST00000611068 PLEKHS1Q5SXH7 462 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 Q6ZSR9 355 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 ABI3BPQ7Z7G0 1075 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 RASGRP3Q8IV61 690 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 USP7Q93009 1102 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 PPM1MQ96MI6 270 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 C1QTNF3Q9BXJ4 246 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 SHARPINQ9H0F6 387 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 RACGAP1Q9H0H5 632 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 TRIM45Q9H8W5 580 aaPredicted RBP15.15■□□□□ 0.02
RTN1-209ENST00000611068 CCNB1IP1Q9NPC3 277 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 PCDHB16Q9NRJ7 776 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 RAD18Q9NS91 495 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 VNN3Q9NY84 501 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 COLQQ9Y215 455 aaPredicted RBP15.15■□□□□ 0.02
RTN1-209ENST00000611068 ORC6Q9Y5N6 252 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 CSNK1G3Q9Y6M4 447 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 CLCA3PQ9Y6N3 262 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 TRAV6A0A075B6T7 132 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 H3BM21 787 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 FABP7O15540 132 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 SLCO2B1O94956 709 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 GLAP06280 429 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 CSF3P09919 207 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 CYP4F2P78329 520 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 CYP4F3Q08477 520 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 SCRN3Q0VDG4 424 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 MAB21L1Q13394 359 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 NAE1Q13564 534 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 EXOSC2Q13868 293 aaKnown RBP15.15■□□□□ 0.02
RTN1-209ENST00000611068 SAXO2Q658L1 398 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 GPR139Q6DWJ6 353 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 TFAP2EQ6VUC0 442 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 TMPRSS11AQ6ZMR5 421 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 OR10Q1Q8NGQ4 319 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 RDH8Q9NYR8 311 aa15.15■□□□□ 0.02
RTN1-209ENST00000611068 A0A1W2PQU0 124 aa15.14■□□□□ 0.01
RTN1-209ENST00000611068 MATN4O95460 622 aa15.14■□□□□ 0.01
RTN1-209ENST00000611068 SLC16A8O95907 504 aa15.14■□□□□ 0.01
RTN1-209ENST00000611068 OTCP00480 354 aa15.14■□□□□ 0.01
RTN1-209ENST00000611068 HSMCR30P0CW71 290 aa15.14■□□□□ 0.01
RTN1-209ENST00000611068 PTX3P26022 381 aaPredicted RBP15.14■□□□□ 0.01
RTN1-209ENST00000611068 EMX2Q04743 252 aa15.14■□□□□ 0.01
RTN1-209ENST00000611068 FGFBP1Q14512 234 aa15.14■□□□□ 0.01
RTN1-209ENST00000611068 LARS2Q15031 903 aaKnown RBP15.14■□□□□ 0.01
RTN1-209ENST00000611068 NR6A1Q15406 480 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms