RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 MGAT4AQ9UM21 535 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 IKBKGQ9Y6K9 419 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 TMEM94Q12767 1356 aa3.48□□□□□ -1.85
SMCHD1-213ENST00000609587 ATAD2BQ9ULI0 1458 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 KIF7Q2M1P5 1343 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 EIF4G1Q04637 1599 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 BCLAF3A2AJT9 711 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 PI15O43692 258 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 NME2P1O60361 137 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 DUSP11O75319 330 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 REC8O95072 547 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 IGHG1P01857 330 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 AHCYP23526 432 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 ETV5P41161 510 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 SLC1A4P43007 532 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 SLC12A3P55017 1021 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 TMED1Q13445 227 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 TAF7Q15545 349 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 SHROOM1Q2M3G4 852 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 HSP90B2PQ58FF3 399 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 IRGCQ6NXR0 463 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 NUFIP2Q7Z417 695 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 ADAMTSL2Q86TH1 951 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 ZNF781Q8N8C0 355 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 RELL2Q8NC24 303 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 OR1K1Q8NGR3 316 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 KIAA1524Q8TCG1 905 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 C16orf58Q96GQ5 468 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 COG3Q96JB2 828 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 JPH2Q9BR39 696 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 CCDC28BQ9BUN5 200 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 LRRCC1Q9C099 1032 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 NT5DC2Q9H857 520 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 SYTL2Q9HCH5 934 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 SUN2Q9UH99 717 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 FAM153AQ9UHL3 310 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 KLK13Q9UKR3 277 aa3.47□□□□□ -1.85
SMCHD1-213ENST00000609587 SALL1Q9NSC2 1324 aa3.46□□□□□ -1.85
SMCHD1-213ENST00000609587 TSPAN2O60636 221 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 FRAT2O75474 233 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 TBX6O95947 436 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 IGHV3-13P01766 116 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 SLC4A1P02730 911 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 APRTP07741 180 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 HIST1H2AGP0C0S8 130 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 OR9G9P0C7N8 305 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 LMO2P25791 158 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 ANP32AP39687 249 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 SSR1P43307 286 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 TKTL1P51854 596 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 SSTP61278 116 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 ACY1Q03154 408 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 LRRC74AQ0VAA2 488 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 ITPK1Q13572 414 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 CARTPTQ16568 116 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 CMPK2Q5EBM0 449 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 AGAP7PQ5VUJ5 663 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 LIPJQ5W064 366 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 C16orf87Q6PH81 154 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 ZNF841Q6ZN19 808 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 ASRGL1Q7L266 308 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 MIER3Q7Z3K6 550 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 GTSCR1Q86UQ5 136 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 LINC00518Q8N0U6 118 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 SAMD12Q8N8I0 201 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 C4orf32Q8N8J7 132 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 ZNRF1Q8ND25 227 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 CHDHQ8NE62 594 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 OR52E1Q8NGJ3 308 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 RDH11Q8TC12 318 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 FBXO25Q8TCJ0 367 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 SLC13A3Q8WWT9 602 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 ANP32BQ92688 251 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 RASL10AQ92737 203 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 TAF4BQ92750 862 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 HIST1H2ACQ93077 130 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 PNPLA2Q96AD5 504 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 HSD17B14Q9BPX1 270 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 SOSTQ9BQB4 213 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 ZNF577Q9BSK1 485 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 SPXQ9BT56 116 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 UBXN6Q9BZV1 441 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 RAI14Q9P0K7 980 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 EIF3KQ9UBQ5 218 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 KCNN3Q9UGI6 736 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 ZNF346Q9UL40 294 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 ENTPD4Q9Y227 616 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 RPH3AQ9Y2J0 694 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 FBXO7Q9Y3I1 522 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 CPQQ9Y646 472 aa3.46□□□□□ -1.86
SMCHD1-213ENST00000609587 A0A1W2PPR1 153 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 ARHGAP42A6NI28 874 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 SH2D1BO14796 132 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 TXNL1O43396 289 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 LRP3O75074 770 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 SYNGR4O95473 234 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 ALPPP05187 535 aa3.45□□□□□ -1.86
SMCHD1-213ENST00000609587 FCER2P06734 321 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms