RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PCBP3P57721 371 aaKnown RBP20.27■□□□□ 0.84
USP6NL-204ENST00000606752 ID2Q02363 134 aa20.27■□□□□ 0.84
USP6NL-204ENST00000606752 CYBRD1Q53TN4 286 aa20.27■□□□□ 0.84
USP6NL-204ENST00000606752 ZNF574Q6ZN55 896 aaPredicted RBP20.27■□□□□ 0.84
USP6NL-204ENST00000606752 GALNT4Q8N4A0 578 aa20.27■□□□□ 0.84
USP6NL-204ENST00000606752 NUP43Q8NFH3 380 aa20.27■□□□□ 0.84
USP6NL-204ENST00000606752 MIPOL1Q8TD10 442 aa20.27■□□□□ 0.84
USP6NL-204ENST00000606752 ANKRD9Q96BM1 317 aaPredicted RBP20.27■□□□□ 0.84
USP6NL-204ENST00000606752 MMABQ96EY8 250 aaPredicted RBP20.27■□□□□ 0.84
USP6NL-204ENST00000606752 CUTCQ9NTM9 273 aa20.27■□□□□ 0.84
USP6NL-204ENST00000606752 HCN3Q9P1Z3 774 aa20.27■□□□□ 0.84
USP6NL-204ENST00000606752 DNAJB9Q9UBS3 223 aa20.27■□□□□ 0.84
USP6NL-204ENST00000606752 ATXN7L1Q9ULK2 861 aaPredicted RBP20.27■□□□□ 0.84
USP6NL-204ENST00000606752 BLACEA4D250 179 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 C5orf58C9J3I9 102 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 M0QX08 132 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 PRSS23O95084 383 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 CST1P01037 141 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 IFNA14P01570 189 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 ATP1B1P05026 303 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 RPLP0P05388 317 aaKnown RBP20.26■□□□□ 0.83
USP6NL-204ENST00000606752 OR12D1P0DN82 309 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 CKMT1AP12532 417 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 PPP2R1BP30154 601 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 MAGEA2P43356 314 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 KHKP50053 298 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 SELENOWP63302 87 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 TXNL4AP83876 142 aaKnown RBP20.26■□□□□ 0.83
USP6NL-204ENST00000606752 LASP1Q14847 261 aaKnown RBP20.26■□□□□ 0.83
USP6NL-204ENST00000606752 FKBP9P1Q75LS8 142 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 TMPRSS9Q7Z410 1059 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 METTL25Q8N6Q8 603 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 HSH2DQ96JZ2 352 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 ZNF570Q96NI8 536 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 DOHHQ9BU89 302 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 C9orf16Q9BUW7 83 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 ARRDC1-AS1Q9H2J1 176 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 LRRN3Q9H3W5 708 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 IL1RAPQ9NPH3 570 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 PDP2Q9P2J9 529 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 TRPC4Q9UBN4 977 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 SERTAD3Q9UJW9 196 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 MRPS33Q9Y291 106 aaKnown RBP20.26■□□□□ 0.83
USP6NL-204ENST00000606752 ZNF451Q9Y4E5 1061 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 ADAMTS9Q9P2N4 1935 aa20.26■□□□□ 0.83
USP6NL-204ENST00000606752 TMEM247A6NEH6 219 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 SAC3D1A6NKF1 404 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 H0YJX3 145 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 UPK1AO00322 258 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 SEMG1P04279 462 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 CLCN2P51788 898 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 PROX2Q3B8N5 592 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 PPP4R4Q6NUP7 873 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 TLDC1Q6P9B6 456 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 VTCN1Q7Z7D3 282 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 PATL1Q86TB9 770 aaKnown RBP20.25■□□□□ 0.83
USP6NL-204ENST00000606752 ZDHHC21Q8IVQ6 265 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 GPR135Q8IZ08 494 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 OR7G2Q8NG99 324 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 OR4D9Q8NGE8 314 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 OR1L3Q8NH93 324 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 XAGE5Q8WWM1 108 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 PEX11GQ96HA9 241 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 TPD52L3Q96J77 140 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 BTBD9Q96Q07 612 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 SLC29A1Q99808 456 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 SMOC1Q9H4F8 434 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 NTN4Q9HB63 628 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 DDX18Q9NVP1 670 aaKnown RBP20.25■□□□□ 0.83
USP6NL-204ENST00000606752 PTGFRNQ9P2B2 879 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 P2RX2Q9UBL9 471 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 OAZ3Q9UMX2 235 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 PCDHGA5Q9Y5G8 931 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 SLITRK5O94991 958 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 BCHEP06276 602 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 DUSP3P51452 185 aaPredicted RBP20.25■□□□□ 0.83
USP6NL-204ENST00000606752 MRPS35P82673 323 aaKnown RBP20.25■□□□□ 0.83
USP6NL-204ENST00000606752 MAT1AQ00266 395 aaKnown RBP20.25■□□□□ 0.83
USP6NL-204ENST00000606752 ZNF595Q8IYB9 648 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 OR2L13Q8N349 312 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 OR5D16Q8NGK9 328 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 TAMM41Q96BW9 452 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 MVB12AQ96EY5 273 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 TMEM19Q96HH6 336 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 VPS50Q96JG6 964 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 DPYSL5Q9BPU6 564 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 LRCH1Q9Y2L9 728 aa20.25■□□□□ 0.83
USP6NL-204ENST00000606752 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 TMEM229AB2RXF0 380 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 KHNYNO15037 678 aaKnown RBP20.24■□□□□ 0.83
USP6NL-204ENST00000606752 PGM3O95394 542 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 ANKRD34CP0C6C1 535 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 ITGA1P56199 1179 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 DAB2P98082 770 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 MAPK11Q15759 364 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 NRF1Q16656 503 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 ZNF628Q5EBL2 1059 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 ARHGAP22Q7Z5H3 698 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 EPHX4Q8IUS5 362 aa20.24■□□□□ 0.83
USP6NL-204ENST00000606752 SLC44A2Q8IWA5 706 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms