RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 EDEM2Q9BV94 578 aa13.51□□□□□ -0.25
ZNF548-212ENST00000602086 ASPSCR1Q9BZE9 553 aa13.51□□□□□ -0.25
ZNF548-212ENST00000602086 C6orf203Q9P0P8 240 aaPredicted RBP13.51□□□□□ -0.25
ZNF548-212ENST00000602086 RALYQ9UKM9 306 aaKnown RBP13.51□□□□□ -0.25
ZNF548-212ENST00000602086 RARRES3Q9UL19 164 aa13.51□□□□□ -0.25
ZNF548-212ENST00000602086 USP22Q9UPT9 525 aa13.51□□□□□ -0.25
ZNF548-212ENST00000602086 CLCA2Q9UQC9 943 aa13.51□□□□□ -0.25
ZNF548-212ENST00000602086 MAP4K5Q9Y4K4 846 aa13.51□□□□□ -0.25
ZNF548-212ENST00000602086 SNX8Q9Y5X2 465 aa13.51□□□□□ -0.25
ZNF548-212ENST00000602086 KMT2BQ9UMN6 2715 aaPredicted RBP13.5□□□□□ -0.25
ZNF548-212ENST00000602086 A0A1B0GX78 115 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 DHRS12A0PJE2 317 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 TMX2-CTNND1H3BSU7 103 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 ASNA1O43681 348 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 FGF17O60258 216 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 PLOD3O60568 738 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 SOX30O94993 753 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 NTRK1P04629 796 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 ARAFP10398 606 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 FGF5P12034 268 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 PSMA4P25789 261 aaKnown RBP13.5□□□□□ -0.25
ZNF548-212ENST00000602086 CRATP43155 626 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 MRPS22P82650 360 aaKnown RBP13.5□□□□□ -0.25
ZNF548-212ENST00000602086 EEF1A2Q05639 463 aaKnown RBP13.5□□□□□ -0.25
ZNF548-212ENST00000602086 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.5□□□□□ -0.25
ZNF548-212ENST00000602086 INTS11Q5TA45 600 aaKnown RBP13.5□□□□□ -0.25
ZNF548-212ENST00000602086 FAM180BQ6P0A1 224 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 TTLL10Q6ZVT0 673 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 CCDC80Q76M96 950 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 RNF130Q86XS8 419 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 ADGRG5Q8IZF4 528 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 TMEM52Q8NDY8 209 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 OR51Q1Q8NH59 317 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 RNF145Q96MT1 663 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 PIF1Q9H611 641 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 A4GALTQ9NPC4 353 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 RXFP3Q9NSD7 469 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 ZCCHC3Q9NUD5 404 aaKnown RBP13.5□□□□□ -0.25
ZNF548-212ENST00000602086 DCAF13Q9NV06 445 aaKnown RBP13.5□□□□□ -0.25
ZNF548-212ENST00000602086 NKX1-2Q9UD57 310 aaPredicted RBP13.5□□□□□ -0.25
ZNF548-212ENST00000602086 FAF1Q9UNN5 650 aaPredicted RBP13.5□□□□□ -0.25
ZNF548-212ENST00000602086 AP4S1Q9Y587 144 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 PCDHGA1Q9Y5H4 931 aa13.5□□□□□ -0.25
ZNF548-212ENST00000602086 COL27A1Q8IZC6 1860 aaPredicted RBP13.5□□□□□ -0.25
ZNF548-212ENST00000602086 NUP210LQ5VU65 1888 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 CASC3O15234 703 aaKnown RBP13.49□□□□□ -0.25
ZNF548-212ENST00000602086 B4GALT2O60909 372 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 C8orf89P0DMQ9 161 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 ETFAP13804 333 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 NCK1P16333 377 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 CSTF2P33240 577 aaKnown RBP eCLIP13.49□□□□□ -0.25
ZNF548-212ENST00000602086 KDELR2P33947 212 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 PRIM2P49643 509 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 DSTNP60981 165 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 MAP4K2Q12851 820 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 SERTAD2Q14140 314 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 ZNF628Q5EBL2 1059 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 COX20Q5RI15 118 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 ZCCHC12Q6PEW1 402 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 ST13P4Q8IZP2 240 aaPredicted RBP13.49□□□□□ -0.25
ZNF548-212ENST00000602086 OR2L13Q8N349 312 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 AGBL5Q8NDL9 886 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 OR9A2Q8NGT5 310 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 OR5AK3PQ8NH89 298 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 PNPT1Q8TCS8 783 aaKnown RBP13.49□□□□□ -0.25
ZNF548-212ENST00000602086 FIG4Q92562 907 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 CTHRC1Q96CG8 243 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 SLC35G5Q96KT7 338 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 ZNF578Q96N58 590 aaPredicted RBP13.49□□□□□ -0.25
ZNF548-212ENST00000602086 UGT2B28Q9BY64 529 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 MAGIXQ9H6Y5 334 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 ZNF304Q9HCX3 659 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 PRTFDC1Q9NRG1 225 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 HCN3Q9P1Z3 774 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 ANAPC2Q9UJX6 822 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 ACSL6Q9UKU0 697 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 C19orf53Q9UNZ5 99 aaPredicted RBP13.49□□□□□ -0.25
ZNF548-212ENST00000602086 SAMD4AQ9UPU9 718 aaKnown RBP13.49□□□□□ -0.25
ZNF548-212ENST00000602086 TMEM184BQ9Y519 407 aaPredicted RBP13.49□□□□□ -0.25
ZNF548-212ENST00000602086 ASCC3Q8N3C0 2202 aaKnown RBP13.49□□□□□ -0.25
ZNF548-212ENST00000602086 LAMA1P25391 3075 aa13.49□□□□□ -0.25
ZNF548-212ENST00000602086 IGLV3-12A0A075B6K2 115 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 B4E171 279 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 FAM227AF5H4B4 570 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 H0Y3Z8 333 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 CASQ2O14958 399 aaPredicted RBP13.48□□□□□ -0.25
ZNF548-212ENST00000602086 HNRNPRO43390 633 aaKnown RBP13.48□□□□□ -0.25
ZNF548-212ENST00000602086 AGR2O95994 175 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 C1QCP02747 245 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 CAPNS1P04632 268 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 CDK4P11802 303 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 FCGR1AP12314 374 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 RORAP35398 523 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 TSPAN7P41732 249 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 XCR1P46094 333 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 KHKP50053 298 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 CDK6Q00534 326 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 MYBPC3Q14896 1274 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 PRICKLE4Q2TBC4 344 aa13.48□□□□□ -0.25
ZNF548-212ENST00000602086 ZNF750Q32MQ0 723 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms