RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 ASB15Q8WXK1 588 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 TMEM125Q96AQ2 219 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 CNRIP1Q96F85 164 aaPredicted RBP15.63■□□□□ 0.09
TRIM28-215ENST00000601150 TAAR6Q96RI8 345 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 RASL10BQ96S79 203 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 HES7Q9BYE0 225 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 MYNNQ9NPC7 610 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 EHD3Q9NZN3 535 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 ZDHHC2Q9UIJ5 367 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 WBP11Q9Y2W2 641 aaKnown RBP15.63■□□□□ 0.09
TRIM28-215ENST00000601150 TMEM120BA0PK00 339 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 TCP11X1B4DZS4 312 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 PIP5K1BO14986 540 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 CRYABP02511 175 aaKnown RBP15.62■□□□□ 0.09
TRIM28-215ENST00000601150 GNLYP22749 145 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 GRK2P25098 689 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 SLC37A1P57057 533 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 MAGOHP61326 146 aaKnown RBP15.62■□□□□ 0.09
TRIM28-215ENST00000601150 C2orf80Q0P641 193 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 KIAA0040Q15053 153 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 MAPKAPK3Q16644 382 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 MPEG1Q2M385 716 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 HHATQ5VTY9 493 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 CES4AQ5XG92 561 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 IKBIPQ70UQ0 350 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 LRRC25Q8N386 305 aaPredicted RBP15.62■□□□□ 0.09
TRIM28-215ENST00000601150 ANKRD42Q8N9B4 389 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 DNAJB8Q8NHS0 232 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRIM28-215ENST00000601150 EXOSC8Q96B26 276 aaKnown RBP15.62■□□□□ 0.09
TRIM28-215ENST00000601150 TLCD1Q96CP7 247 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 ZNF681Q96N22 645 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 PAIP2Q9BPZ3 127 aaKnown RBP15.62■□□□□ 0.09
TRIM28-215ENST00000601150 MIEF1Q9NQG6 463 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 PFDN4Q9NQP4 134 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 GIMAP4Q9NUV9 329 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 ERVK-11Q9UQG0 969 aa15.62■□□□□ 0.09
TRIM28-215ENST00000601150 A8MVJ9 347 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 LSM1O15116 133 aaKnown RBP15.61■□□□□ 0.09
TRIM28-215ENST00000601150 NME2P1O60361 137 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 LYPLA1O75608 230 aaPredicted RBP15.61■□□□□ 0.09
TRIM28-215ENST00000601150 SNUPNO95149 360 aaKnown RBP15.61■□□□□ 0.09
TRIM28-215ENST00000601150 CLPSP04118 112 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 CT62P0C5K7 136 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 DDCP20711 480 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 NME2P22392 152 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 SSTR4P31391 388 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 SOX3P41225 446 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 UQCRFS1P47985 274 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 ABCE1P61221 599 aaKnown RBP15.61■□□□□ 0.09
TRIM28-215ENST00000601150 FUT7Q11130 342 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 MAP4K2Q12851 820 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 PRICKLE4Q2TBC4 344 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 PIGGQ5H8A4 983 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 FAM71E1Q6IPT2 247 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 FAM180BQ6P0A1 224 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 OPN5Q6U736 354 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 GALNTL5Q7Z4T8 443 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 VWA5B2Q8N398 1253 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 FAM98AQ8NCA5 519 aaKnown RBP15.61■□□□□ 0.09
TRIM28-215ENST00000601150 OR7G1Q8NGA0 311 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 SLC22A8Q8TCC7 542 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 FCRL1Q96LA6 429 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 CCT7Q99832 543 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 BRINP2Q9C0B6 783 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 WWTR1Q9GZV5 400 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 SLC35C2Q9NQQ7 365 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 OLAHQ9NV23 265 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 ARGLU1Q9NWB6 273 aaPredicted RBP15.61■□□□□ 0.09
TRIM28-215ENST00000601150 HPF1Q9NWY4 346 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 MAT2BQ9NZL9 334 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 ENTPD4Q9Y227 616 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 KLF13Q9Y2Y9 288 aaPredicted RBP15.61■□□□□ 0.09
TRIM28-215ENST00000601150 TMED5Q9Y3A6 229 aa15.61■□□□□ 0.09
TRIM28-215ENST00000601150 EML6Q6ZMW3 1958 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 ITM2AO43736 263 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 OR6B1O95007 311 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 CBX6O95503 412 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 BGNP21810 368 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 SLC18A1P54219 525 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 RPL38P63173 70 aaKnown RBP15.6■□□□□ 0.09
TRIM28-215ENST00000601150 PMP22Q01453 160 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 DUSP2Q05923 314 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 MGAT2Q10469 447 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 EBPQ15125 230 aaKnown RBP15.6■□□□□ 0.09
TRIM28-215ENST00000601150 GALNTL6Q49A17 601 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 RFTN2Q52LD8 501 aaPredicted RBP15.6■□□□□ 0.09
TRIM28-215ENST00000601150 XKR7Q5GH72 579 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 AGBL2Q5U5Z8 902 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 ZNF324BQ6AW86 544 aaPredicted RBP15.6■□□□□ 0.09
TRIM28-215ENST00000601150 FAM111BQ6SJ93 734 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 IL20RBQ6UXL0 311 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 SLC15A4Q8N697 577 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 ZNF615Q8N8J6 731 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 ADCY4Q8NFM4 1077 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 NR4A3Q92570 626 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 PPP3R2Q96LZ3 170 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 GAL3ST4Q96RP7 486 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 OR10A5Q9H207 317 aa15.6■□□□□ 0.09
TRIM28-215ENST00000601150 TIMMDC1Q9NPL8 285 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms