RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 ZNF763Q0D2J5 394 aa17.4■□□□□ 0.38
UPF1-210ENST00000600689 TOR2AQ5JU69 321 aa17.4■□□□□ 0.38
UPF1-210ENST00000600689 BCL2L15Q5TBC7 163 aa17.4■□□□□ 0.38
UPF1-210ENST00000600689 SLC7A13Q8TCU3 470 aa17.4■□□□□ 0.38
UPF1-210ENST00000600689 VWCEQ96DN2 955 aa17.4■□□□□ 0.38
UPF1-210ENST00000600689 SPNS1Q9H2V7 528 aa17.4■□□□□ 0.38
UPF1-210ENST00000600689 EVA1BQ9NVM1 165 aa17.4■□□□□ 0.38
UPF1-210ENST00000600689 CHD7Q9P2D1 2997 aa17.4■□□□□ 0.38
UPF1-210ENST00000600689 RNASET2O00584 256 aaKnown RBP17.39■□□□□ 0.38
UPF1-210ENST00000600689 HRO43593 1189 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 IGSF6O95976 241 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 CXCL10P02778 98 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 CELP19835 753 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 CPN2P22792 545 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 PTX3P26022 381 aaPredicted RBP17.39■□□□□ 0.38
UPF1-210ENST00000600689 ELAVL4P26378 380 aaKnown RBP17.39■□□□□ 0.38
UPF1-210ENST00000600689 SRP54P61011 504 aaKnown RBP17.39■□□□□ 0.38
UPF1-210ENST00000600689 MLLT11Q13015 90 aaPredicted RBP17.39■□□□□ 0.38
UPF1-210ENST00000600689 ZNF267Q14586 743 aaPredicted RBP17.39■□□□□ 0.38
UPF1-210ENST00000600689 TOR1AIP1Q5JTV8 583 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 MZT2BQ6NZ67 158 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 MARCH9Q86YJ5 346 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 FAM20CQ8IXL6 584 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 PROKR2Q8NFJ6 384 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 ADAMTS19Q8TE59 1207 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 BTN2A2Q8WVV5 523 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 TMEM19Q96HH6 336 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 WDFY2Q96P53 400 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 YIPF4Q9BSR8 244 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 CFHR5Q9BXR6 569 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 EGLN3Q9H6Z9 239 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 CXorf36Q9H7Y0 433 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 HCN2Q9UL51 889 aa17.39■□□□□ 0.38
UPF1-210ENST00000600689 SOD2P04179 222 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 NR2F6P10588 404 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 XPAP23025 273 aaPredicted RBP17.39■□□□□ 0.37
UPF1-210ENST00000600689 CTSCP53634 463 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 TCTN3Q6NUS6 607 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 C11orf96Q7Z7L8 435 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 IQCHQ86VS3 1027 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 OXR1Q8N573 874 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 GPR32P1Q8NGA4 272 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 CHTF18Q8WVB6 975 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 OVCA2Q8WZ82 227 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 TMEM159Q96B96 161 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 SLC6A16Q9GZN6 736 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 KCNK12Q9HB15 430 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 RC3H2Q9HBD1 1191 aaKnown RBP17.39■□□□□ 0.37
UPF1-210ENST00000600689 SATB2Q9UPW6 733 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 LEUTXA8MZ59 168 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 NRG2O14511 850 aaPredicted RBP17.39■□□□□ 0.37
UPF1-210ENST00000600689 SLC30A4O14863 429 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 DPM1O60762 260 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 FKTNO75072 461 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 H1F0P07305 194 aaKnown RBP17.39■□□□□ 0.37
UPF1-210ENST00000600689 TRAPPC2P0DI81 140 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 TRAPPC2BP0DI82 140 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 ZNF250P15622 560 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 MAB21L1Q13394 359 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 FCN2Q15485 313 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 ZNF791Q3KP31 576 aaPredicted RBP17.39■□□□□ 0.37
UPF1-210ENST00000600689 TJAP1Q5JTD0 557 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 ANKRD54Q6NXT1 300 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 TPRG1Q6ZUI0 275 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 OR8J1Q8NGP2 316 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 LRRC20Q8TCA0 184 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 SLC38A5Q8WUX1 472 aa17.39■□□□□ 0.37
UPF1-210ENST00000600689 RBFOX1Q9NWB1 397 aaKnown RBP17.39■□□□□ 0.37
UPF1-210ENST00000600689 GFYI3L273 518 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 PAHP00439 452 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 LALBAP00709 142 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 IL1AP01583 271 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 GJA1P17302 382 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 PRKAG1P54619 331 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 ZNF770Q6IQ21 691 aaPredicted RBP17.38■□□□□ 0.37
UPF1-210ENST00000600689 CHST14Q8NCH0 376 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 C16orf78Q8WTQ4 265 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 SMG9Q9H0W8 520 aaKnown RBP17.38■□□□□ 0.37
UPF1-210ENST00000600689 RNF208Q9H0X6 261 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 ATP13A2Q9NQ11 1180 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 OR51B4Q9Y5P0 310 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 C1QBP02746 253 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 STATHP02808 62 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 OR12D1P0DN82 309 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 ALPPL2P10696 532 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 ATP6V1E1P36543 226 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 ETV3P41162 512 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 LIMS1P48059 325 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 RRAS2P62070 204 aaPredicted RBP17.38■□□□□ 0.37
UPF1-210ENST00000600689 DEFB103AP81534 67 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 LMAN2Q12907 356 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 SYT14P1Q58G82 188 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 KIAA1161Q6NSJ0 714 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 METTL2BQ6P1Q9 378 aaKnown RBP17.38■□□□□ 0.37
UPF1-210ENST00000600689 MED27Q6P2C8 311 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 MTFR2Q6P444 385 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 ASZ1Q8WWH4 475 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 XAGE5Q8WWM1 108 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 MSANTD3Q96H12 275 aa17.38■□□□□ 0.37
UPF1-210ENST00000600689 TMEM169Q96HH4 297 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms