RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 PORP16435 677 aaPredicted RBP18.85■□□□□ 0.61
PNKP-214ENST00000600573 AVPR2P30518 371 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 FEN1P39748 380 aaKnown RBP18.85■□□□□ 0.61
PNKP-214ENST00000600573 DUSP3P51452 185 aaPredicted RBP18.85■□□□□ 0.61
PNKP-214ENST00000600573 MAPK10P53779 464 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 BIKQ13323 160 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 DEFB110Q30KQ9 67 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 AMZ1Q400G9 498 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 SLC36A3Q495N2 470 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 OR2T5Q6IEZ7 315 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 REEP3Q6NUK4 255 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 FAM180BQ6P0A1 224 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 TMEM71Q6P5X7 295 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 DGLUCYQ7Z3D6 616 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 PIWIL3Q7Z3Z3 882 aaKnown RBP18.85■□□□□ 0.61
PNKP-214ENST00000600573 VTCN1Q7Z7D3 282 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 OR10Q1Q8NGQ4 319 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 OR2T29Q8NH02 315 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 CYGBQ8WWM9 190 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 CCDC74AQ96AQ1 378 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 ELP4Q96EB1 424 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 MVB12AQ96EY5 273 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 RBM4BQ9BQ04 359 aaKnown RBP18.85■□□□□ 0.61
PNKP-214ENST00000600573 RBM4Q9BWF3 364 aaKnown RBP18.85■□□□□ 0.61
PNKP-214ENST00000600573 TMEM121BQ9BXQ6 578 aaPredicted RBP18.85■□□□□ 0.61
PNKP-214ENST00000600573 TMEM131Q92545 1883 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 C5orf58C9J3I9 102 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 THRBP10828 461 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 RNH1P13489 461 aaKnown RBP18.85■□□□□ 0.61
PNKP-214ENST00000600573 AQP1P29972 269 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 DCTP40126 519 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 KHKP50053 298 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 CASP9P55211 416 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 ITGA1P56199 1179 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 EPS8Q12929 822 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 TP53BP2Q13625 1128 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 TRIM61Q5EBN2 209 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 GATAD2AQ86YP4 633 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 Q8N9G6 341 aaPredicted RBP18.85■□□□□ 0.61
PNKP-214ENST00000600573 TPD52L3Q96J77 140 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 DOHHQ9BU89 302 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 STARD5Q9NSY2 213 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 IRAK4Q9NWZ3 460 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 PTGFRNQ9P2B2 879 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 ABCG2Q9UNQ0 655 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 PCDHGA5Q9Y5G8 931 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 KNL1Q8NG31 2342 aa18.85■□□□□ 0.61
PNKP-214ENST00000600573 A0A0C4DFX4 3053 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 WASHC1A8K0Z3 465 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 H0YAE9 185 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 SGK494L7N484 410 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 ASNA1O43681 348 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 SIGLEC6O43699 453 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 AGR2O95994 175 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 SMIM18P0DKX4 95 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 CPMP14384 443 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 MATN1P21941 496 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 CRYBA2P53672 197 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 IST1P53990 364 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 SELENOWP63302 87 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 SHQ1Q6PI26 577 aaKnown RBP18.84■□□□□ 0.61
PNKP-214ENST00000600573 ZC3H7AQ8IWR0 971 aaKnown RBP18.84■□□□□ 0.61
PNKP-214ENST00000600573 ZNF595Q8IYB9 648 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 OSBPL10Q9BXB5 764 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 GABARAPL1Q9H0R8 117 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 ZNF768Q9H5H4 540 aaKnown RBP18.84■□□□□ 0.61
PNKP-214ENST00000600573 P2RX2Q9UBL9 471 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 SERTAD3Q9UJW9 196 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 PCDHGB5Q9Y5G0 923 aa18.84■□□□□ 0.61
PNKP-214ENST00000600573 DUXAA6NLW8 204 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 hCG_2039718K7EN88 272 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 CHST10O43529 356 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 FOXS1O43638 330 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 DPM1O60762 260 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 GCM2O75603 506 aaPredicted RBP18.83■□□□□ 0.61
PNKP-214ENST00000600573 SOX30O94993 753 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 SNAP29O95721 258 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 ATP1B1P05026 303 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 TFPTP0C1Z6 253 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 NELFEP18615 380 aaKnown RBP18.83■□□□□ 0.61
PNKP-214ENST00000600573 PCBP3P57721 371 aaKnown RBP18.83■□□□□ 0.61
PNKP-214ENST00000600573 SIM1P81133 766 aaPredicted RBP18.83■□□□□ 0.61
PNKP-214ENST00000600573 PPP2R2BQ00005 443 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 CFHR1Q03591 330 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 ANGPT1Q15389 498 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 PRAMEF8Q5VWM4 474 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 PRAMEF7Q5VXH5 474 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 PRSS41Q7RTY9 318 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 HORMAD2Q8N7B1 307 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 OR9A4Q8NGU2 314 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 RASSF5Q8WWW0 418 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 CSF3RQ99062 836 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 MRPS26Q9BYN8 205 aaKnown RBP18.83■□□□□ 0.61
PNKP-214ENST00000600573 FANCEQ9HB96 536 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 KLHL3Q9UH77 587 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 CDC14AQ9UNH5 594 aa18.83■□□□□ 0.61
PNKP-214ENST00000600573 ZNF860A6NHJ4 632 aa18.82■□□□□ 0.6
PNKP-214ENST00000600573 CLDN4O14493 209 aa18.82■□□□□ 0.6
PNKP-214ENST00000600573 ANKRD34CP0C6C1 535 aa18.82■□□□□ 0.6
PNKP-214ENST00000600573 C8orf89P0DMQ9 161 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms