RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 NPIPA2E9PIF3 369 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 NPIPA3F8WFD2 350 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 C19orf84I3L1E1 186 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 CLPSP04118 112 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 PORP16435 677 aaPredicted RBP14.56□□□□□ -0.08
VRK3-221ENST00000600284 CHRNB4P30926 498 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 PIGAP37287 484 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 KIR3DL1P43629 444 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 XKP51811 444 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 NTRK2Q16620 822 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 TBCELQ5QJ74 424 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 ZNF441Q8N8Z8 693 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 C17orf47Q8NEP4 570 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 OR7G1Q8NGA0 311 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 LILRB4Q8NHJ6 448 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 SELENOMQ8WWX9 145 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 UCN3Q969E3 161 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 SMC6Q96SB8 1091 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 TRIM8Q9BZR9 551 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 ZFP64Q9NPA5 681 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 FETUBQ9UGM5 382 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 NFU1Q9UMS0 254 aa14.56□□□□□ -0.08
VRK3-221ENST00000600284 ATP6AP2A0A1C7CYW4 349 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 FIGNL2A6NMB9 653 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 TP53I11O14683 189 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 ATP6AP2O75787 350 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 PDYNP01213 254 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 SNRPB2P08579 225 aaKnown RBP14.55□□□□□ -0.08
VRK3-221ENST00000600284 HOXD4P09016 255 aaPredicted RBP14.55□□□□□ -0.08
VRK3-221ENST00000600284 HSD3B1P14060 373 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 CPMP14384 443 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 HSD3B2P26439 372 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 GCAP28676 217 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 SSTR2P30874 369 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 HSD17B3P37058 310 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 MAN2A2P49641 1150 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 NR0B1P51843 470 aaKnown RBP14.55□□□□□ -0.08
VRK3-221ENST00000600284 MAPK12P53778 367 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 CDH13P55290 713 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 TRA2BP62995 288 aaKnown RBP14.55□□□□□ -0.08
VRK3-221ENST00000600284 KCNJ2P63252 427 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 CLCQ05315 142 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 SGO1Q5FBB7 561 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 C6orf163Q5TEZ5 329 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 HLA-DQA1Q5Y7H0 255 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 SLC48A1Q6P1K1 146 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 LETMD1Q6P1Q0 360 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 COMMD6Q7Z4G1 85 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 ZNF295-AS1Q8N0V1 137 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 LRRC25Q8N386 305 aaPredicted RBP14.55□□□□□ -0.08
VRK3-221ENST00000600284 ZNF615Q8N8J6 731 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 FAM13CQ8NE31 585 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 DOK4Q8TEW6 326 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 SARAFQ96BY9 339 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 C14orf79Q96F83 325 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 SECISBP2Q96T21 854 aaKnown RBP14.55□□□□□ -0.08
VRK3-221ENST00000600284 TREX2Q9BQ50 279 aaPredicted RBP14.55□□□□□ -0.08
VRK3-221ENST00000600284 OR10A5Q9H207 317 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 LDAHQ9H6V9 325 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 PROK2Q9HC23 129 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 ACKR4Q9NPB9 350 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 CES1P1Q9UKY3 287 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 CNOT11Q9UKZ1 510 aaKnown RBP14.55□□□□□ -0.08
VRK3-221ENST00000600284 PSME2Q9UL46 239 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 SLC12A4Q9UP95 1085 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 PCDHGB3Q9Y5G1 929 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 PCDHA9Q9Y5H5 950 aa14.55□□□□□ -0.08
VRK3-221ENST00000600284 LRBAP50851 2863 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 TRGV5A0A0B4J1U4 118 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 A0A1B0GTL3 188 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 GOLGA6L10A6NI86 522 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 PPP6CO00743 305 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 RIPK2O43353 540 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 WDR1O75083 606 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 ACVR2AP27037 513 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 SSTR4P31391 388 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 TMED10P49755 219 aaKnown RBP14.54□□□□□ -0.08
VRK3-221ENST00000600284 NRG3P56975 720 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 GALNT1Q10472 559 aaPredicted RBP14.54□□□□□ -0.08
VRK3-221ENST00000600284 PMPCAQ10713 525 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 RASA2Q15283 850 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 ZNF678Q5SXM1 525 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 TEX35Q5T0J7 233 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 RPS27LQ71UM5 84 aaKnown RBP14.54□□□□□ -0.08
VRK3-221ENST00000600284 SLC22A9Q8IVM8 553 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 OR10G3Q8NGC4 313 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 OR5M3Q8NGP4 307 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 ACMSDQ8TDX5 336 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 ADIPOR1Q96A54 375 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 ZNF703Q9H7S9 590 aaPredicted RBP14.54□□□□□ -0.08
VRK3-221ENST00000600284 FARSBQ9NSD9 589 aaKnown RBP14.54□□□□□ -0.08
VRK3-221ENST00000600284 PNPLA3Q9NST1 481 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 TMEM216Q9P0N5 145 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 VPS29Q9UBQ0 182 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 ZNF225Q9UK10 706 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 RNF6Q9Y252 685 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 CFL2Q9Y281 166 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 STK38LQ9Y2H1 464 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 NPFFR2Q9Y5X5 522 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 LIPGQ9Y5X9 500 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms