RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, human

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-221	ENST00000598808	ZNF780B	Q9Y6R6	833 aa		18.78	■□□□□ 0.6
IRF3-221	ENST00000598808	UBD	O15205	165 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	GSC2	O15499	205 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	AKAP10	O43572	662 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	LRAT	O95237	230 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	FEN1	P39748	380 aa	Known RBP	18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	GSTM5	P46439	218 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	STT3A	P46977	705 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	XK	P51811	444 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	AGAP7P	Q5VUJ5	663 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	LARP4	Q71RC2	724 aa	Known RBP eCLIP	18.77	■□□□□ 0.6	1e-6	■■□□□ 13.6
IRF3-221	ENST00000598808	OR14A16	Q8NHC5	309 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	AGAP4	Q96P64	663 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	PELO	Q9BRX2	385 aa	Known RBP	18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	CNPPD1	Q9BV87	410 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	MYNN	Q9NPC7	610 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	TMEM45A	Q9NWC5	275 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	SIRT5	Q9NXA8	310 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	ENTPD4	Q9Y227	616 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	CLDN16	Q9Y5I7	305 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	PIEZO2	Q9H5I5	2752 aa		18.77	■□□□□ 0.6
IRF3-221	ENST00000598808	TRBV11-1	A0A0K0K1C0	115 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808		A0A1W2PS29	197 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	EIF4E1B	A6NMX2	242 aa	Known RBP	18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	ATXN7	O15265	892 aa	Predicted RBP	18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	COX4I1	P13073	169 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	DRD2	P14416	443 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	SDC1	P18827	310 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	NT5E	P21589	574 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	ZNF750	Q32MQ0	723 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	LINC00696	Q6ZRV3	163 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	LIX1	Q8N485	282 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	C7orf57	Q8NEG2	295 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	B3GNT7	Q8NFL0	401 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	M1AP	Q8TC57	530 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	NCLN	Q969V3	563 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	C11orf24	Q96F05	449 aa	Predicted RBP	18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	COPS7A	Q9UBW8	275 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	BAIAP2L1	Q9UHR4	511 aa		18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	EIF3L	Q9Y262	564 aa	Known RBP	18.77	■□□□□ 0.59
IRF3-221	ENST00000598808	SFTPC	P11686	197 aa		18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	TACR1	P25103	407 aa		18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	MRPL19	P49406	292 aa	Known RBP	18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	IGLV3-21	P80748	117 aa	Predicted RBP	18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	KIAA0040	Q15053	153 aa		18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	C6orf136	Q5SQH8	315 aa		18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	FCRLB	Q6BAA4	426 aa		18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	OGFOD2	Q6N063	350 aa		18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	RINL	Q6ZS11	566 aa		18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	ASB18	Q6ZVZ8	466 aa		18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	IKBIP	Q70UQ0	350 aa		18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	SPATA19	Q7Z5L4	167 aa		18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	ST13P4	Q8IZP2	240 aa	Predicted RBP	18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	CADM1	Q9BY67	442 aa	Known RBP	18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	AKTIP	Q9H8T0	292 aa		18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	TUBD1	Q9UJT1	453 aa		18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	PCDHGA9	Q9Y5G4	932 aa	Known RBP	18.76	■□□□□ 0.59
IRF3-221	ENST00000598808	NPIPB8	E9PQR5	432 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	CEACAM4	O75871	244 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	BCKDHA	P12694	445 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	CPM	P14384	443 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	POR	P16435	677 aa	Predicted RBP	18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	PCSK2	P16519	638 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	DDC	P20711	480 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	PTGER1	P34995	402 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	STX1B	P61266	288 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	MXRA7	P84157	204 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	MAD2L1	Q13257	205 aa	Predicted RBP	18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	BIK	Q13323	160 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	CYLC2	Q14093	348 aa	Predicted RBP	18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	IL23R	Q5VWK5	629 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	JMJD6	Q6NYC1	403 aa	Predicted RBP	18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	TICAM1	Q8IUC6	712 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	RBM15B	Q8NDT2	890 aa	Known RBP	18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	SLC2A12	Q8TD20	617 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	THAP3	Q8WTV1	239 aa	Predicted RBP	18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	PTPMT1	Q8WUK0	201 aa	Predicted RBP	18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	SLC39A7	Q92504	469 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	RIT1	Q92963	219 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	UTP4	Q969X6	686 aa	Known RBP	18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	VMP1	Q96GC9	406 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	EGLN2	Q96KS0	407 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	BBS4	Q96RK4	519 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	DEFB126	Q9BYW3	111 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	BRINP2	Q9C0B6	783 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	MMP25	Q9NPA2	562 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	ZNF451	Q9Y4E5	1061 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	COPG1	Q9Y678	874 aa	Known RBP	18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	ATRX	P46100	2492 aa		18.75	■□□□□ 0.59
IRF3-221	ENST00000598808	SLC35E2	P0CK97	266 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	LBP	P18428	481 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	CSNK2A2	P19784	350 aa	Predicted RBP	18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	HPCAL1	P37235	193 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	ASMT	P46597	345 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	CLCN2	P51788	898 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	ERVK-8	P63133	956 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	ZNF267	Q14586	743 aa	Predicted RBP	18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	GSTA3	Q16772	222 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	SMU1	Q2TAY7	513 aa		18.74	■□□□□ 0.59
IRF3-221	ENST00000598808	B3GNTL1	Q67FW5	361 aa	Predicted RBP	18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms