RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 EXPH5Q8NEV8 1989 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 A8MVJ9 347 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 CLPSP04118 112 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 SERPINE1P05121 402 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 SSTR4P31391 388 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 SOX3P41225 446 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 PMP22Q01453 160 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 DUSP2Q05923 314 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 C2orf80Q0P641 193 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 MRPL49Q13405 166 aaKnown RBP12.84□□□□□ -0.35
UPF1-205ENST00000598209 KIAA0040Q15053 153 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 CHI3L2Q15782 390 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 MAPKAPK3Q16644 382 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 CES4AQ5XG92 561 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 NOXRED1Q6NXP6 359 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 SLC29A4Q7RTT9 530 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 GALNTL5Q7Z4T8 443 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 GPALPP1Q8IXQ4 340 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 DDIASQ8IXT1 998 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 ANKRD42Q8N9B4 389 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 OR2T11Q8NH01 316 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 EXOSC8Q96B26 276 aaKnown RBP12.84□□□□□ -0.35
UPF1-205ENST00000598209 ZNF681Q96N22 645 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 GAL3ST4Q96RP7 486 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 PFDN4Q9NQP4 134 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 OLAHQ9NV23 265 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 HPF1Q9NWY4 346 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 C1orf109Q9NX04 203 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 ZDHHC2Q9UIJ5 367 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 ZNF780BQ9Y6R6 833 aa12.84□□□□□ -0.35
UPF1-205ENST00000598209 PRRC2CQ9Y520 2896 aaKnown RBP12.83□□□□□ -0.35
UPF1-205ENST00000598209 OR6C76A6NM76 312 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 PIP5K1BO14986 540 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 ITM2AO43736 263 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 NME2P1O60361 137 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 ZNF354AO60765 605 aaPredicted RBP12.83□□□□□ -0.36
UPF1-205ENST00000598209 LYPLA1O75608 230 aaPredicted RBP12.83□□□□□ -0.36
UPF1-205ENST00000598209 OR6B1O95007 311 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 CBX6O95503 412 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 HSPA4LO95757 839 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 CRYABP02511 175 aaKnown RBP12.83□□□□□ -0.36
UPF1-205ENST00000598209 ATP1B1P05026 303 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 DDCP20711 480 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 NME2P22392 152 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 PTGER1P34995 402 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 FUT7Q11130 342 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 EBPQ15125 230 aaKnown RBP12.83□□□□□ -0.36
UPF1-205ENST00000598209 MPEG1Q2M385 716 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 PRICKLE4Q2TBC4 344 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 PIGGQ5H8A4 983 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 ZNF324BQ6AW86 544 aaPredicted RBP12.83□□□□□ -0.36
UPF1-205ENST00000598209 FAM71E1Q6IPT2 247 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 FAM111BQ6SJ93 734 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 IL20RBQ6UXL0 311 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 LRRC25Q8N386 305 aaPredicted RBP12.83□□□□□ -0.36
UPF1-205ENST00000598209 VWA5B2Q8N398 1253 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 FAM98AQ8NCA5 519 aaKnown RBP12.83□□□□□ -0.36
UPF1-205ENST00000598209 DNAJB8Q8NHS0 232 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.83□□□□□ -0.36
UPF1-205ENST00000598209 NR4A3Q92570 626 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 TLCD1Q96CP7 247 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 PAIP2Q9BPZ3 127 aaKnown RBP12.83□□□□□ -0.36
UPF1-205ENST00000598209 SLX1AQ9BQ83 275 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 BRINP2Q9C0B6 783 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 WWTR1Q9GZV5 400 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 MYNNQ9NPC7 610 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 GIMAP4Q9NUV9 329 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 MAT2BQ9NZL9 334 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 EHD3Q9NZN3 535 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 ERVK-11Q9UQG0 969 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 ENTPD4Q9Y227 616 aa12.83□□□□□ -0.36
UPF1-205ENST00000598209 TMEM120BA0PK00 339 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 ASPDHA6ND91 283 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 ANKUB1A6NFN9 424 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 TMEM114B3SHH9 223 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 LSM1O15116 133 aaKnown RBP12.82□□□□□ -0.36
UPF1-205ENST00000598209 EDN3P14138 238 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 S1PR1P21453 382 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 BGNP21810 368 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 ABCE1P61221 599 aaKnown RBP12.82□□□□□ -0.36
UPF1-205ENST00000598209 MAGOHP61326 146 aaKnown RBP12.82□□□□□ -0.36
UPF1-205ENST00000598209 RPL38P63173 70 aaKnown RBP12.82□□□□□ -0.36
UPF1-205ENST00000598209 SRSF11Q05519 484 aaKnown RBP12.82□□□□□ -0.36
UPF1-205ENST00000598209 MGAT2Q10469 447 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 MAP4K2Q12851 820 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 LTB4RQ15722 352 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 GALNTL6Q49A17 601 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 HHATQ5VTY9 493 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 OPN5Q6U736 354 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 MDGA2Q7Z553 956 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.82□□□□□ -0.36
UPF1-205ENST00000598209 TICAM1Q8IUC6 712 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 CCDC116Q8IYX3 515 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 SAMD14Q8IZD0 417 aaPredicted RBP12.82□□□□□ -0.36
UPF1-205ENST00000598209 ZNF615Q8N8J6 731 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 ST6GALNAC3Q8NDV1 305 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 ADCY4Q8NFM4 1077 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 OR7G1Q8NGA0 311 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 SLC22A8Q8TCC7 542 aa12.82□□□□□ -0.36
UPF1-205ENST00000598209 FCRL1Q96LA6 429 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms