RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 PRICKLE4Q2TBC4 344 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 XKR7Q5GH72 579 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 PIGGQ5H8A4 983 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 RNFT1Q5M7Z0 435 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 SLC25A25Q6KCM7 469 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 ANKRD42Q8N9B4 389 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 GALNT11Q8NCW6 608 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 ADCY4Q8NFM4 1077 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 OR8K3Q8NH51 312 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 NUDT8Q8WV74 236 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 FAR1Q8WVX9 515 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 EXOSC8Q96B26 276 aaKnown RBP10.33□□□□□ -0.76
VRK3-210ENST00000596121 KLHL29Q96CT2 875 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 RASL10BQ96S79 203 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 ANKRA2Q9H9E1 313 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 LRTM1Q9HBL6 345 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 EML4Q9HC35 981 aaKnown RBP10.33□□□□□ -0.76
VRK3-210ENST00000596121 C1orf109Q9NX04 203 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 MAT2BQ9NZL9 334 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 MAP10Q9P2G4 905 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 BAIAP2L1Q9UHR4 511 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 ZNF639Q9UID6 485 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 UTS2RQ9UKP6 389 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 DTX4Q9Y2E6 619 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 YARS2Q9Y2Z4 477 aaKnown RBP10.33□□□□□ -0.76
VRK3-210ENST00000596121 RGS14O43566 566 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 SLC25A12O75746 678 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 ZWINTO95229 277 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 CBX7O95931 251 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 ATP1B1P05026 303 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 SERPINE1P05121 402 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 CSNK2A2P19784 350 aaPredicted RBP10.32□□□□□ -0.76
VRK3-210ENST00000596121 NT5EP21589 574 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 SOX3P41225 446 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 SSR4P51571 173 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 TDGF1P3P51864 188 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 ABCE1P61221 599 aaKnown RBP10.32□□□□□ -0.76
VRK3-210ENST00000596121 KCNC4Q03721 635 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 ZNF763Q0D2J5 394 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 MAP4K2Q12851 820 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 EXOSC7Q15024 291 aaKnown RBP10.32□□□□□ -0.76
VRK3-210ENST00000596121 EBPQ15125 230 aaKnown RBP10.32□□□□□ -0.76
VRK3-210ENST00000596121 CEBPEQ15744 281 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 TRMT12Q53H54 448 aaKnown RBP10.32□□□□□ -0.76
VRK3-210ENST00000596121 TMEM64Q6YI46 380 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 RNF111Q6ZNA4 994 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 GALNTL5Q7Z4T8 443 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.32□□□□□ -0.76
VRK3-210ENST00000596121 TICAM1Q8IUC6 712 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 GALNT12Q8IXK2 581 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 CCDC116Q8IYX3 515 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 ZNF781Q8N8C0 355 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 ZNF441Q8N8Z8 693 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 C7orf57Q8NEG2 295 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 CDC26Q8NHZ8 85 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 SUN3Q8TAQ9 357 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 FAM76AQ8TAV0 307 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 CTHRC1Q96CG8 243 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 SLX1AQ9BQ83 275 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 PELOQ9BRX2 385 aaKnown RBP10.32□□□□□ -0.76
VRK3-210ENST00000596121 FAIM2Q9BWQ8 316 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 WWTR1Q9GZV5 400 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 MYNNQ9NPC7 610 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 DEPPQ9NTK1 212 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 ABI3Q9P2A4 366 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 PCDHGB6Q9Y5F9 930 aa10.32□□□□□ -0.76
VRK3-210ENST00000596121 ESPL1Q14674 2120 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 CROCCQ5TZA2 2017 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 HIVEP3Q5T1R4 2406 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 A0A0G2JMM0 328 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 ATP6AP2A0A1C7CYW4 349 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 A0A1W2PPB8 328 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 A0A1W2PRS3 328 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 CLEC18AA5D8T8 446 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 PINLYPA6NC86 204 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 ASPDHA6ND91 283 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 KIR3DP1A8MWS1 328 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 MYO1GB0I1T2 1018 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 TMEM114B3SHH9 223 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 FCHO1O14526 889 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 NME2P1O60361 137 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 VPS4BO75351 444 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 SKAP2O75563 359 aaPredicted RBP10.31□□□□□ -0.76
VRK3-210ENST00000596121 ATP6AP2O75787 350 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 HSPA4LO95757 839 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 CD46P15529 392 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 PCSK2P16519 638 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 SDC1P18827 310 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 DDCP20711 480 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 NME2P22392 152 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 NR0B1P51843 470 aaKnown RBP10.31□□□□□ -0.76
VRK3-210ENST00000596121 RPL38P63173 70 aaKnown RBP10.31□□□□□ -0.76
VRK3-210ENST00000596121 MRPS35P82673 323 aaKnown RBP10.31□□□□□ -0.76
VRK3-210ENST00000596121 BST1Q10588 318 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 MAPKAPK3Q16644 382 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 MPEG1Q2M385 716 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 EIF2S3LQ2VIR3 472 aaKnown RBP10.31□□□□□ -0.76
VRK3-210ENST00000596121 GALNTL6Q49A17 601 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 TTMPQ5BVD1 217 aa10.31□□□□□ -0.76
VRK3-210ENST00000596121 ZNF628Q5EBL2 1059 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms