RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 E9PLN8 166 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 FFAR3O14843 346 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 DSCR3O14972 297 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 GPR42O15529 346 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 SERPINA7P05543 415 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 C8BP07358 591 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 G6PDP11413 515 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 HSD3B1P14060 373 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 ACADSP16219 412 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 HSD3B2P26439 372 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 ACADLP28330 430 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 HNF4AP41235 474 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 BDKRB1P46663 353 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 HNRNPFP52597 415 aaKnown RBP12.02□□□□□ -0.49
SCAF1-202ENST00000595242 RPL38P63173 70 aaKnown RBP12.02□□□□□ -0.49
SCAF1-202ENST00000595242 KLC1Q07866 573 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 CSTF3Q12996 717 aaKnown RBP12.02□□□□□ -0.49
SCAF1-202ENST00000595242 DSG2Q14126 1118 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 PCOLCEQ15113 449 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 VPS26BQ4G0F5 336 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 RFTN2Q52LD8 501 aaPredicted RBP12.02□□□□□ -0.49
SCAF1-202ENST00000595242 C6orf10Q5SRN2 563 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 IL23RQ5VWK5 629 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 ATG9BQ674R7 924 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 GRHL2Q6ISB3 625 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 C3P1Q6ZMU1 363 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 RNF111Q6ZNA4 994 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 NDUFAF7Q7L592 441 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 ARPINQ7Z6K5 226 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 THOC6Q86W42 341 aaKnown RBP12.02□□□□□ -0.49
SCAF1-202ENST00000595242 DOLPP1Q86YN1 238 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 GOLM1Q8NBJ4 401 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 SLC26A7Q8TE54 656 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 WDR34Q96EX3 536 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 CMTM7Q96FZ5 175 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 DMRTA2Q96SC8 542 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 PKP4Q99569 1192 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 VKORC1Q9BQB6 163 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 TACO1Q9BSH4 297 aaKnown RBP12.02□□□□□ -0.49
SCAF1-202ENST00000595242 ACPTQ9BZG2 426 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 RNF32Q9H0A6 362 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 TSPAN10Q9H1Z9 355 aaPredicted RBP12.02□□□□□ -0.49
SCAF1-202ENST00000595242 MUC13Q9H3R2 512 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 NMRK1Q9NWW6 199 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 C1orf109Q9NX04 203 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 KCNN3Q9UGI6 736 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 EIF3LQ9Y262 564 aaKnown RBP12.02□□□□□ -0.49
SCAF1-202ENST00000595242 SLC22A14Q9Y267 594 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 TMED5Q9Y3A6 229 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 POLR3HQ9Y535 204 aaPredicted RBP12.02□□□□□ -0.49
SCAF1-202ENST00000595242 FBN1P35555 2871 aaKnown RBP12.01□□□□□ -0.49
SCAF1-202ENST00000595242 NBEAL1Q6ZS30 2694 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 A0A0J9YY10 115 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 PRSS51A0A1B0GVH4 220 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 H0YIV9 168 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 NME4O00746 187 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 ZNHIT1O43257 154 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 BMP10O95393 424 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 PDYNP01213 254 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 CELA2AP08217 269 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 PRPS2P11908 318 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 COX6A1P12074 109 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 ABOP16442 354 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 SLC6A2P23975 617 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 PDHA2P29803 388 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 OR1D4P47884 311 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 RAB28P51157 221 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 SLC7A2P52569 658 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 NME5P56597 212 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 BNIP2Q12982 314 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 FXNQ16595 210 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 C10orf62Q5T681 223 aaPredicted RBP12.01□□□□□ -0.49
SCAF1-202ENST00000595242 FRG2Q64ET8 278 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 DMRTC2Q8IXT2 367 aaPredicted RBP12.01□□□□□ -0.49
SCAF1-202ENST00000595242 SLC15A3Q8IY34 581 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 LRRC56Q8IYG6 542 aaPredicted RBP12.01□□□□□ -0.49
SCAF1-202ENST00000595242 METTL27Q8N6F8 245 aaPredicted RBP12.01□□□□□ -0.49
SCAF1-202ENST00000595242 PPFIBP2Q8ND30 876 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 FLVCR1-AS1Q8TAF5 88 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 WDR20Q8TBZ3 569 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 SELENOMQ8WWX9 145 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 PYDC1Q8WXC3 89 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 ZUFSPQ96AP4 578 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 LRRC58Q96CX6 371 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 FRG2BQ96QU4 278 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 SGPP1Q9BX95 441 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 OR52A5Q9H2C5 316 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 MVB12BQ9H7P6 319 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 FARSBQ9NSD9 589 aaKnown RBP12.01□□□□□ -0.49
SCAF1-202ENST00000595242 CUTCQ9NTM9 273 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 INTS7Q9NVH2 962 aaKnown RBP12.01□□□□□ -0.49
SCAF1-202ENST00000595242 SPHK1Q9NYA1 384 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 STMN3Q9NZ72 180 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 ADA2Q9NZK5 511 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 C6orf203Q9P0P8 240 aaPredicted RBP12.01□□□□□ -0.49
SCAF1-202ENST00000595242 ST6GALNAC2Q9UJ37 374 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 PACSIN3Q9UKS6 424 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 PPT2Q9UMR5 302 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 ICKQ9UPZ9 632 aa12.01□□□□□ -0.49
SCAF1-202ENST00000595242 PCDHA9Q9Y5H5 950 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms