RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 CPSF7Q8N684 471 aaKnown RBP21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 GLB1L3Q8NCI6 653 aaPredicted RBP21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 MORN4Q8NDC4 146 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 B3GNT7Q8NFL0 401 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 OR9A2Q8NGT5 310 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 CTHRC1Q96CG8 243 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 SENP5Q96HI0 755 aaPredicted RBP21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 ING2Q9H160 280 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 ACSS1Q9NUB1 689 aaPredicted RBP21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 MAT2BQ9NZL9 334 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 USP24Q9UPU5 2620 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 DDX5P17844 614 aaKnown RBP21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 EFNA1P20827 205 aaPredicted RBP21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 S1PR1P21453 382 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 NTSP30990 170 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 PGDP52209 483 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 SQLEQ14534 574 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 DPY19L1Q2PZI1 675 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 BTBD16Q32M84 506 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 ZNF628Q5EBL2 1059 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 OR4F3Q6IEY1 312 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 FAM111BQ6SJ93 734 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 ZNF551Q7Z340 670 aaPredicted RBP21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 GALNT12Q8IXK2 581 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 NATD1Q8N6N6 113 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 ZNF321PQ8N8H1 164 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 SLC2A12Q8TD20 617 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 ZNF721Q8TF20 911 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 ATP13A2Q9NQ11 1180 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 ZNF639Q9UID6 485 aa21.02■□□□□ 0.95
SNRNP70-204ENST00000595231 FAM107AO95990 144 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 IGKV3-11P04433 115 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 KIR3DL1P43629 444 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 DGKQP52824 942 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 RRADP55042 308 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 MLC1Q15049 377 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 EXT1Q16394 746 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 APLFQ8IW19 511 aaPredicted RBP21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 CLEC1AQ8NC01 280 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 M1APQ8TC57 530 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 ZNF675Q8TD23 568 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 ELP5Q8TE02 316 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 ZBED6CLQ96FA7 236 aaPredicted RBP21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 FBXL20Q96IG2 436 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 PRORYQ9H606 182 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 SAR1AQ9NR31 198 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 ZNF223Q9UK11 482 aaPredicted RBP21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 ERVK-11Q9UQG0 969 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 DOCK10Q96BY6 2186 aa21.01■□□□□ 0.95
SNRNP70-204ENST00000595231 ICAM2P13598 275 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 POLR2JP52435 117 aaKnown RBP21■□□□□ 0.95
SNRNP70-204ENST00000595231 MRPS35P82673 323 aaKnown RBP21■□□□□ 0.95
SNRNP70-204ENST00000595231 FUT7Q11130 342 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 AIMP2Q13155 320 aaKnown RBP21■□□□□ 0.95
SNRNP70-204ENST00000595231 ZNF267Q14586 743 aaPredicted RBP21■□□□□ 0.95
SNRNP70-204ENST00000595231 ST3GAL2Q16842 350 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 TRMT12Q53H54 448 aaKnown RBP21■□□□□ 0.95
SNRNP70-204ENST00000595231 SIMC1Q8NDZ2 872 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 OR1N1Q8NGS0 311 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 NCLNQ969V3 563 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 ZBTB18Q99592 522 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 SEMA4CQ9C0C4 833 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 OR8D2Q9GZM6 311 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 MMP25Q9NPA2 562 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 TMEM45AQ9NWC5 275 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 CCDC167Q9P0B6 97 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 ERVK-19Q9WJR5 959 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 NUP214P35658 2090 aaPredicted RBP21■□□□□ 0.95
SNRNP70-204ENST00000595231 PKD1L2Q7Z442 2459 aa21■□□□□ 0.95
SNRNP70-204ENST00000595231 A0A1W2PRB8 838 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 FAM234BA2RU67 622 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 CLPSP04118 112 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 PGRP06401 933 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 S100A3P33764 101 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 MANFP55145 182 aaKnown RBP20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 SOX8P57073 446 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 BLOC1S3Q6QNY0 202 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 VWA5B2Q8N398 1253 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 KIF2BQ8N4N8 673 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 KAT2AQ92830 837 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 NUDT9Q9BW91 350 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 SLC52A3Q9NQ40 469 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 ATMQ13315 3056 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 RNASET2O00584 256 aaKnown RBP20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 DYRK3O43781 588 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 DNAJB5O75953 348 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 IL6P05231 212 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 SERPINA7P05543 415 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 SSTR4P31391 388 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 HSPB3Q12988 150 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 KBTBD2Q8IY47 623 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 OR7G2Q8NG99 324 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 APOBEC4Q8WW27 367 aaKnown RBP20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 PSMF1Q92530 271 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 CNPPD1Q9BV87 410 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 NMUR2Q9GZQ4 415 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 ANKRA2Q9H9E1 313 aa20.99■□□□□ 0.95
SNRNP70-204ENST00000595231 PRSS51A0A1B0GVH4 220 aa20.98■□□□□ 0.95
SNRNP70-204ENST00000595231 PLOD2O00469 737 aa20.98■□□□□ 0.95
SNRNP70-204ENST00000595231 ITGAMP11215 1152 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms